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基于微流控芯片的现场应用诊断系统:无需后置增菌处理,可灵敏、简便地检测婴儿配方奶粉中可回收单株克罗诺杆菌。

Labchip-based diagnosis system for on-site application: Sensitive and easy-to-implement detection of single recoverable Cronobacter in infant formula without post-enrichment treatment.

机构信息

Department of Food and Biotechnology, College of Science and Technology, Korea University, Sejong 30019, South Korea.

Department of Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul 02841, South Korea.

出版信息

Int J Food Microbiol. 2020 Aug 16;327:108659. doi: 10.1016/j.ijfoodmicro.2020.108659. Epub 2020 May 11.

Abstract

Microfluidic labchips have achieved much advancement in the molecular diagnosis of foodborne pathogens. Whereas difficulties in the flow control during the transportation of liquid fluids can occur and should be overcome. Manipulations of reaction temperature and the complex procedures from sample pre-treatment to analysis in a single chip device are major obstacles for the on-site application. Thus, the efficient temperature control of samples without any flow of reaction fluids in microfluidic channels of plastic chip and the simplest protocol omitting post-enrichment processing steps may overcome these limitations represented by the stability and the complexity, respectively. This study aims to develop a novel type of labchip and thermocycler specialized for the gene amplification in microfluidic channels and to evaluate the detectability by sensing the minimum recoverable level of Cronobacter in powdered infant formula (PIF). We developed a thermocycling device accelerating reactions through dual heating-blocks optimized to control temperatures of samples in microfluidic-channels by direct contact with labchip sequentially and repetitively. The structural design of microfluidic channels was to eliminate interference factors associated with the optical detection of fluorescent signals (without distortion due to air bubbles in the reaction chamber). To improve the applicability, a portable device and simplified operation to allow direct loading of samples in the chip without post-enrichment procedures were also adopted. Detection performance was evaluated by a sensitivity/specificity tests using 50 isolates of Cronobacter. Cross-reactivity tests for non-Cronobacter organisms and gDNA [human, raw materials of PIF (cow, soybean)] showed that there was no interference-factor causing false-positive results. In terms of the applied research conducted by using PIF, the enrichment of samples without broth medium (distilled water) displayed outstanding performance and 12 h of incubation facilitated detecting target at concentration as low as 1 CFU/300 g PIF (as initial contamination level) without post-enrichment treatment. Validation of the operation conditions using 30 commercial PIF products was also consistent. The present study presents a novel approach of microfluidic technology with perspective to not only the performance and the practicability [easy-to-implement protocol, portable materials, cost-effectiveness (the use of a miniaturized plastic chip requires a minimum level of materials)] for on-site diagnosis.

摘要

微流控芯片在食源性病原体的分子诊断方面取得了很大进展。然而,在液体输送过程中可能会出现流量控制方面的困难,需要加以克服。在单个芯片设备中对反应温度的操控以及从样品预处理到分析的复杂程序是现场应用的主要障碍。因此,在塑料芯片的微流道中无需任何反应流体流动即可实现对样品的高效温度控制,以及省略后富集处理步骤的最简单方案,可能分别克服以稳定性和复杂性为代表的这些限制。本研究旨在开发一种新型的实验室芯片和热循环仪,专门用于微流道中的基因扩增,并通过检测粉状婴儿配方食品(PIF)中可恢复的最低克罗诺杆菌数量来评估其检测能力。我们开发了一种热循环装置,通过优化的双加热块加速反应,通过与微流道中的芯片直接接触,依次、重复地控制样品温度。微流道的结构设计消除了与荧光信号光学检测相关的干扰因素(由于反应室中没有气泡,因此不会产生失真)。为了提高适用性,还采用了便携式设备和简化操作,允许直接将样品加载到芯片中,无需进行后富集处理。使用 50 株克罗诺杆菌分离株进行了灵敏度/特异性测试,评估了检测性能。非克罗诺杆菌和 gDNA[人、PIF 原材料(牛、大豆)]的交叉反应测试表明,没有导致假阳性结果的干扰因素。就使用 PIF 进行的应用研究而言,无需使用肉汤培养基(蒸馏水)进行样品富集时,表现出优异的性能,孵育 12 小时后,无需后富集处理,即可在浓度低至 1 CFU/300 g PIF(作为初始污染水平)的情况下检测到目标。使用 30 种商业 PIF 产品验证操作条件的结果也一致。本研究提出了一种新颖的微流控技术方法,不仅具有性能和实用性(易于实施的方案、便携式材料、成本效益(使用小型化塑料芯片需要最低水平的材料)),适用于现场诊断。

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