School of Biomedical Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong.
School of Biomedical Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong
Diabetes Care. 2020 Jul;43(7):1416-1426. doi: 10.2337/dc20-0643. Epub 2020 May 19.
COVID-19 has become a major public health problem. There is good evidence that ACE2 is a receptor for SARS-CoV-2, and high expression of may increase susceptibility to infection. We aimed to explore risk factors affecting susceptibility to infection and prioritize drug repositioning candidates, based on Mendelian randomization (MR) studies on lung expression.
We conducted a phenome-wide MR study to prioritize diseases/traits and blood proteins causally linked to lung expression in GTEx. We also explored drug candidates whose targets overlapped with the top-ranked proteins in MR, as these drugs may alter expression and may be clinically relevant.
The most consistent finding was tentative evidence of an association between diabetes-related traits and increased expression. Based on one of the largest genome-wide association studies on type 2 diabetes mellitus (T2DM) to date ( = 898,130), T2DM was causally linked to raised expression ( = 2.91E-03; MR-IVW). Significant associations (at nominal level; < 0.05) with expression were observed across multiple diabetes data sets and analytic methods for T1DM, T2DM, and related traits including early start of insulin. Other diseases/traits having nominal significant associations with increased expression included inflammatory bowel disease, (estrogen receptor-positive) breast cancer, lung cancer, asthma, smoking, and elevated alanine aminotransferase. We also identified drugs that may target the top-ranked proteins in MR, such as fostamatinib and zinc.
Our analysis suggested that diabetes and related traits may increase expression, which may influence susceptibility to infection (or more severe infection). However, none of these findings withstood rigorous multiple testing corrections (at false discovery rate <0.05). Proteome-wide MR analyses might help uncover mechanisms underlying expression and guide drug repositioning. Further studies are required to verify our findings.
COVID-19 已成为重大公共卫生问题。有充分证据表明 ACE2 是 SARS-CoV-2 的受体,而 高表达可能增加感染易感性。我们旨在根据 GTEx 肺表达的孟德尔随机化 (MR) 研究,探索影响感染易感性的危险因素,并确定药物重定位的候选药物。
我们进行了一项表型全基因组关联研究,以确定与 GTEx 肺表达相关的疾病/特征和血液蛋白的优先候选药物。我们还探索了与 MR 中排名最高的蛋白质重叠的药物候选物,因为这些药物可能会改变 表达,并且可能具有临床相关性。
最一致的发现是糖尿病相关特征与 表达增加之间存在关联的初步证据。基于迄今为止最大的 2 型糖尿病 (T2DM) 全基因组关联研究之一( = 898,130),T2DM 与升高的 表达呈因果关系( = 2.91E-03;MR-IVW)。在 T1DM、T2DM 和相关特征(包括胰岛素早期使用)的多个糖尿病数据集和分析方法中,均观察到与 表达具有显著关联(在名义水平上; < 0.05)。与增加的表达具有显著关联的其他疾病/特征包括炎症性肠病、(雌激素受体阳性)乳腺癌、肺癌、哮喘、吸烟和丙氨酸氨基转移酶升高。我们还确定了可能针对 MR 中排名最高的蛋白质的药物,如 fostamatinib 和锌。
我们的分析表明,糖尿病和相关特征可能会增加 表达,这可能会影响感染易感性(或更严重的感染)。然而,这些发现都没有通过严格的多重检验校正(假发现率 <0.05)。蛋白质组全基因组关联分析可能有助于揭示 表达的机制,并指导药物重定位。需要进一步的研究来验证我们的发现。