Su Sumeyye, Shahriyari Leili
Department of Mathematics, University of Texas Arlington, Arlington, TX 76019, USA.
Department of Mathematics and Statistics, University of Massachusetts Amherst, Amherst, MA 01003, USA.
R Soc Open Sci. 2020 Apr 29;7(4):191422. doi: 10.1098/rsos.191422. eCollection 2020 Apr.
Recent advances in biotechnology led to generation of large complex biological and clinical datasets that can be used to infer the underlying mechanism of many diseases and arrive at personalized treatments. One of these datasets are the whole genome profiles, including a good collection of publicly available human gene expression datasets. In this project, we analysed gene expression profiles of patients with renal cell carcinoma (RCC). We found that the regulator of G-protein signalling 5 (RGS5) might play a crucial role in initiation and progression of RCC, and it might be prognostic. We observed that a high expression level of RGS5 is associated with better survival months. Importantly, when the grade of tumour increases, the RGS5 expression level significantly decreases. Although there is no difference between expression level of RGS5 in male and female patients with primary tumours in the right kidney, among patients with primary tumours in the left kidney, females have a significantly higher RGS5 expression than male patients. Interestingly, we also observed a significant association between the high expression level of RGS5 and low serum calcium level and elevated white blood cells level.
生物技术的最新进展催生了大量复杂的生物学和临床数据集,这些数据集可用于推断多种疾病的潜在机制并实现个性化治疗。其中一个数据集是全基因组图谱,包括大量公开可用的人类基因表达数据集。在本项目中,我们分析了肾细胞癌(RCC)患者的基因表达谱。我们发现G蛋白信号调节因子5(RGS5)可能在RCC的发生和发展中起关键作用,并且可能具有预后价值。我们观察到RGS5的高表达水平与更好的生存月数相关。重要的是,当肿瘤分级增加时,RGS5的表达水平显著降低。虽然右肾原发性肿瘤的男性和女性患者中RGS5的表达水平没有差异,但在左肾原发性肿瘤患者中,女性的RGS5表达明显高于男性患者。有趣的是,我们还观察到RGS5的高表达水平与低血清钙水平和白细胞水平升高之间存在显著关联。