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DNA凝胶电泳中的电场梯度与条带锐化

Electric field gradients and band sharpening in DNA gel electrophoresis.

作者信息

Slater G W, Noolandi J

机构信息

Xerox Research Centre of Canada, Mississauga, Ontario.

出版信息

Electrophoresis. 1988 Oct;9(10):643-6. doi: 10.1002/elps.1150091003.

DOI:10.1002/elps.1150091003
PMID:3243227
Abstract

A mathematical study of the effect of non-uniform electric fields on the width of DNA electrophoretic bands is presented. Using a simple model, we show that field gradients sharpen these bands during an experiment if the corresponding gradient of electrophoretic velocity is large enough. This is in agreement with experimental results indicating that narrower bands form when pulsed field electrophoresis is carried out in the presence of field gradients. Moreover, it is shown that there is in fact an optimal experimental duration that maximizes separation. Finally, gradients are also predicted to reduce the relative mobilities of the DNA fragments, which is a serious drawback of this technique.

摘要

本文对非均匀电场对DNA电泳条带宽度的影响进行了数学研究。通过一个简单的模型,我们表明,如果电泳速度的相应梯度足够大,在实验过程中场梯度会使这些条带变窄。这与实验结果一致,实验结果表明,在场梯度存在的情况下进行脉冲场电泳时会形成更窄的条带。此外,研究表明实际上存在一个使分离最大化的最佳实验持续时间。最后,预计场梯度也会降低DNA片段的相对迁移率,这是该技术的一个严重缺点。

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引用本文的文献

1
Diffusion of DNA molecules in gel at high electric fields.DNA分子在高电场下于凝胶中的扩散。
J Biol Phys. 2005 Dec;31(3-4):365-73. doi: 10.1007/s10867-005-7287-2.
2
Rapid separation of large DNA fragments.
Dokl Biochem Biophys. 2005 Jul-Aug;403:272-4. doi: 10.1007/s10628-005-0090-y.