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双孢蘑菇菌株间菌丝体相互作用的蛋白质组学研究。

Proteomic investigation of interhyphal interactions between strains of Agaricus bisporus.

机构信息

Department of Biology, Maynooth University, Maynooth, Co. Kildare, Ireland; Teagasc Food Research Centre, Ashtown, Dublin 15, D15 KN3K, Ireland.

Department of Biology, Maynooth University, Maynooth, Co. Kildare, Ireland; Kathleen Lonsdale Institute for Human Health Research, Maynooth University, Maynooth, Co. Kildare, Ireland.

出版信息

Fungal Biol. 2020 Jun;124(6):579-591. doi: 10.1016/j.funbio.2020.02.011. Epub 2020 Feb 28.

Abstract

Hyphae of filamentous fungi undergo polar extension, bifurcation and hyphal fusion to form reticulating networks of mycelia. Hyphal fusion or anastomosis, a ubiquitous process among filamentous fungi, is a vital strategy for how fungi expand over their substrate and interact with or recognise self- and non-self hyphae of neighbouring mycelia in their environment. Morphological and genetic characterisation of anastomosis has been studied in many model fungal species, but little is known of the direct proteomic response of two interacting fungal isolates. Agaricus bisporus, the most widely cultivated edible mushroom crop worldwide, was used as an in vitro model to profile the proteomes of interacting cultures. The globally cultivated strain (A15) was paired with two distinct strains; a commercial hybrid strain and a wild isolate strain. Each co-culture presented a different interaction ranging from complete vegetative compatibility (self), lack of interactions, and antagonistic interactions. These incompatible strains are the focus of research into disease-resistance in commercial crops as the spread of intracellular pathogens, namely mycoviruses, is limited by the lack of interhyphal anastomosis. Unique proteomic responses were detected between all co-cultures. An array of cell wall modifying enzymes, plus fungal growth and morphogenesis proteins were found in significantly (P < 0.05) altered abundances. Nitrogen metabolism dominated in the intracellular proteome, with evidence of nitrogen starvation between competing, non-compatible cultures. Changes in key enzymes of A. bisporus morphogenesis were observed, particularly via increased abundance of glucanosyltransferase in competing interactions and certain chitinases in vegetative compatible interactions only. Carbohydrate-active enzyme arsenals are expanded in antagonistic interactions in A. bisporus. Pathways involved in carbohydrate metabolism and genetic information processing were higher in interacting cultures, most notably during self-recognition. New insights into the differential response of interacting strains of A. bisporus will enhance our understanding of potential barriers to viral transmission through vegetative incompatibility. Our results suggest that a differential proteomic response occurs between A. bisporus at strain-level and findings from this work may guide future proteomic investigation of fungal anastomosis.

摘要

丝状真菌的菌丝经历极性延伸、分叉和菌丝融合,形成网状菌丝体网络。菌丝融合或吻合,这是丝状真菌中普遍存在的过程,是真菌在其基质上扩展以及与环境中相邻菌丝体的自我和非自我菌丝体相互作用或识别的重要策略。在许多模式真菌物种中,已经对吻合的形态和遗传特征进行了研究,但对于两个相互作用的真菌分离株的直接蛋白质组学反应知之甚少。双孢蘑菇,是全球范围内最广泛种植的食用蘑菇作物,被用作体外模型来分析相互作用培养物的蛋白质组。全球种植的菌株(A15)与两个不同的菌株配对;一个商业杂交菌株和一个野生分离菌株。每个共培养物都呈现出不同的相互作用,从完全营养相容性(自我)、缺乏相互作用到拮抗相互作用。这些不兼容的菌株是研究商业作物疾病抗性的重点,因为细胞内病原体(即真菌病毒)的传播受到缺乏菌丝吻合的限制。在所有共培养物之间都检测到了独特的蛋白质组反应。发现了一系列细胞壁修饰酶,以及真菌生长和形态发生蛋白,其丰度发生了显著(P<0.05)变化。氮代谢在细胞内蛋白质组中占主导地位,在竞争、不兼容的培养物之间存在氮饥饿的证据。观察到双孢蘑菇形态发生的关键酶发生变化,特别是在竞争相互作用中通过增加葡聚糖转移酶的丰度,以及在营养相容性相互作用中仅存在某些几丁质酶。双孢蘑菇中拮抗相互作用扩展了碳水化合物活性酶库。在相互作用的培养物中,参与碳水化合物代谢和遗传信息处理的途径更高,特别是在自我识别过程中。本研究加深了对双孢蘑菇相互作用菌株差异反应的理解,这将有助于我们了解通过营养不相容性阻止病毒传播的潜在障碍。我们的结果表明,在菌株水平上,双孢蘑菇之间会发生差异蛋白质组反应,并且这项工作的结果可能会指导未来对真菌吻合的蛋白质组学研究。

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