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. 中热休克蛋白的生物信息学分析、表达谱分析及功能表征

Bioinformatics Analysis, Expression Profiling, and Functional Characterization of Heat Shock Proteins in .

作者信息

Hu Xin, Tang Xue, Zhou Yumei, Ahmad Bilal, Zhang Deli, Zeng Yue, Wei Jingyi, Deng Liling, Chen Shijiang, Pan Yu

机构信息

College of Horticulture and Landscape Architecture, Southwest University, Chongqing 400715, China.

Key Laboratory of Horticulture Science for Southern Mountainous Regions, Chongqing 400715, China.

出版信息

Bioengineering (Basel). 2023 Mar 22;10(3):390. doi: 10.3390/bioengineering10030390.

Abstract

Heat shock proteins (HSPs) play critical roles in regulating different mechanisms under high-temperature conditions. HSPs have been identified and well-studied in different plants. However, there is a lack of information about their genomic organization and roles in medicinal plants and fungi, especially in We identified sixteen heat shock proteins (HSPs) in and analyzed in terms of phylogenetic analysis, gene structure, motif distribution patterns, physiochemical properties, and expression comparison in different strains. Based on phylogenetic analysis, HSPs were divided into five subgroups (WcHSP100, WcHSP90, WcHSP70, WcHSP60, and WcsHSP). Subgroups WcHSP100s, WcHSP90s, WcHSP70s, WcHSP60, and WcsHSPs were further divided into 3, 2, 3, 1, and 6 subfamilies, respectively. Moreover, the expression profiling of all HSP genes in five strains of under different temperature extremes revealed that expression of most HSPs were induced by high temperature. However, every subfamily showed different expression suggesting distinctive role in heat stress tolerance. WcHSP70-4, WcHSP90-1, and WcHSP100-1 showed the highest response to high temperature stress. Heterologous expression of WcHSP70-4, WcHSP90-1, and WcHSP100-1 genes in enhanced survival rate of during heat stress. These findings suggest the role of heat shock genes in the high temperature stress tolerance.

摘要

热休克蛋白(HSPs)在高温条件下调节不同机制中发挥着关键作用。HSPs已在不同植物中得到鉴定和深入研究。然而,关于它们在药用植物和真菌中的基因组组织及其作用的信息却很缺乏,尤其是在……我们在……中鉴定出16种热休克蛋白(HSPs),并从系统发育分析、基因结构、基序分布模式、理化性质以及不同菌株中的表达比较等方面进行了分析。基于系统发育分析,HSPs被分为五个亚组(WcHSP100、WcHSP90、WcHSP70、WcHSP60和WcsHSP)。WcHSP100亚组、WcHSP90亚组、WcHSP70亚组、WcHSP60和WcsHSP亚组又分别进一步分为3个、2个、3个、1个和6个亚家族。此外,在五个……菌株中,所有HSP基因在不同极端温度下的表达谱显示,大多数HSPs的表达受高温诱导。然而,每个亚家族表现出不同的表达,表明在耐热胁迫中具有独特作用。WcHSP70 - 4、WcHSP90 - 1和WcHSP100 - 1对高温胁迫反应最为强烈。WcHSP70 - 4、WcHSP90 - 1和WcHSP100 - 1基因在……中的异源表达提高了……在热胁迫期间的存活率。这些发现表明……热休克基因在高温胁迫耐受性中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/141a/10045903/17c14e3fea5d/bioengineering-10-00390-g001.jpg

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