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生物数据挖掘和机器学习技术在检测和诊断新型冠状病毒 (COVID-19) 中的作用:系统评价。

Role of biological Data Mining and Machine Learning Techniques in Detecting and Diagnosing the Novel Coronavirus (COVID-19): A Systematic Review.

机构信息

Informatics Institute for Postgraduate Studies (IIPS), Iraqi Commission for Computers and Informatics (ICCI), Baghdad, Iraq.

College of Business Informatics, University of Information Technology and Communications (UOITC), Baghdad, Iraq.

出版信息

J Med Syst. 2020 May 25;44(7):122. doi: 10.1007/s10916-020-01582-x.


DOI:10.1007/s10916-020-01582-x
PMID:32451808
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7247866/
Abstract

Coronaviruses (CoVs) are a large family of viruses that are common in many animal species, including camels, cattle, cats and bats. Animal CoVs, such as Middle East respiratory syndrome-CoV, severe acute respiratory syndrome (SARS)-CoV, and the new virus named SARS-CoV-2, rarely infect and spread among humans. On January 30, 2020, the International Health Regulations Emergency Committee of the World Health Organisation declared the outbreak of the resulting disease from this new CoV called 'COVID-19', as a 'public health emergency of international concern'. This global pandemic has affected almost the whole planet and caused the death of more than 315,131 patients as of the date of this article. In this context, publishers, journals and researchers are urged to research different domains and stop the spread of this deadly virus. The increasing interest in developing artificial intelligence (AI) applications has addressed several medical problems. However, such applications remain insufficient given the high potential threat posed by this virus to global public health. This systematic review addresses automated AI applications based on data mining and machine learning (ML) algorithms for detecting and diagnosing COVID-19. We aimed to obtain an overview of this critical virus, address the limitations of utilising data mining and ML algorithms, and provide the health sector with the benefits of this technique. We used five databases, namely, IEEE Xplore, Web of Science, PubMed, ScienceDirect and Scopus and performed three sequences of search queries between 2010 and 2020. Accurate exclusion criteria and selection strategy were applied to screen the obtained 1305 articles. Only eight articles were fully evaluated and included in this review, and this number only emphasised the insufficiency of research in this important area. After analysing all included studies, the results were distributed following the year of publication and the commonly used data mining and ML algorithms. The results found in all papers were discussed to find the gaps in all reviewed papers. Characteristics, such as motivations, challenges, limitations, recommendations, case studies, and features and classes used, were analysed in detail. This study reviewed the state-of-the-art techniques for CoV prediction algorithms based on data mining and ML assessment. The reliability and acceptability of extracted information and datasets from implemented technologies in the literature were considered. Findings showed that researchers must proceed with insights they gain, focus on identifying solutions for CoV problems, and introduce new improvements. The growing emphasis on data mining and ML techniques in medical fields can provide the right environment for change and improvement.

摘要

冠状病毒(CoVs)是一大类病毒,在许多动物物种中很常见,包括骆驼、牛、猫和蝙蝠。动物 CoVs,如中东呼吸综合征-CoV、严重急性呼吸综合征(SARS)-CoV 和新命名的 SARS-CoV-2,很少在人类中感染和传播。2020 年 1 月 30 日,世界卫生组织国际卫生条例突发事件委员会宣布,由这种新型 CoV 引起的疾病爆发称为“COVID-19”,是“国际关注的突发公共卫生事件”。这场全球大流行几乎影响了整个地球,导致截至本文发表日期已有超过 315131 人死亡。在这种情况下,出版商、期刊和研究人员被敦促研究不同领域,并阻止这种致命病毒的传播。对开发人工智能(AI)应用的兴趣日益增加,解决了许多医疗问题。然而,鉴于这种病毒对全球公共卫生构成的高潜在威胁,此类应用仍然不足。本系统评价针对基于数据挖掘和机器学习(ML)算法的 COVID-19 自动 AI 应用进行了探讨。我们旨在全面了解这种关键病毒,探讨利用数据挖掘和 ML 算法的局限性,并为卫生部门提供该技术的优势。我们使用了五个数据库,即 IEEE Xplore、Web of Science、PubMed、ScienceDirect 和 Scopus,并在 2010 年至 2020 年期间进行了三次搜索查询序列。准确的排除标准和选择策略被用于筛选获得的 1305 篇文章。只有 8 篇文章经过全面评估并被纳入本综述,这一数字仅强调了在这一重要领域研究的不足。在分析了所有纳入的研究后,结果按照发表年份和常用的数据挖掘和 ML 算法进行了分布。对所有论文中的结果进行了讨论,以找出所有综述论文中的差距。对动机、挑战、局限性、建议、案例研究以及使用的特征和类别等特征进行了详细分析。本研究综述了基于数据挖掘和 ML 评估的 CoV 预测算法的最新技术。考虑了文献中实施技术从提取信息和数据集的可靠性和可接受性。研究结果表明,研究人员必须根据他们获得的见解继续前进,专注于为 CoV 问题找到解决方案,并引入新的改进。对医疗领域数据挖掘和 ML 技术的日益重视可以为变革和改进提供合适的环境。

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