• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

序列重复在转录调控和基因组进化中的作用。

The Role of Sequence Duplication in Transcriptional Regulation and Genome Evolution.

作者信息

Vaschetto Luis M, Ortiz Natalia

机构信息

Instituto de Diversidad y Ecología Animal, Consejo Nacional de Investigaciones Científicas y Técnicas (IDEA, CONICET), Av. Vélez Sarsfield 299, X5000JJC Córdoba, Argentina.

Facultad de Ciencias Exactas, Físicas y Naturales, Universidad Nacional de Córdoba, (FCEFyN, UNC), Av. Vélez Sarsfield 299, X5000JJC Córdoba, Argentina.

出版信息

Curr Genomics. 2019 Sep;20(6):405-408. doi: 10.2174/1389202920666190320140721.

DOI:10.2174/1389202920666190320140721
PMID:32476997
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7235390/
Abstract

Sequence duplication is nowadays recognized as an important mechanism that underlies the evolution of eukaryote genomes, being indeed one of the most powerful strategies for the generation of adaptive diversity by modulating transcriptional activity. The evolutionary novelties simultaneously associated with sequence duplication and differential gene expression can be collectively referred to as duplication-mediated transcriptional regulation. In the last years, evidence has emerged supporting the idea that sequence duplication and functionalization represent important evolutionary strategies acting at the genome level, and both coding and non-coding sequences have been found to be targets of such events. Moreover, it has been proposed that deleterious effects of sequence duplication might be potentially silenced by endogenous cell machinery (, RNA interference, epigenetic repressive marks, ). Along these lines, our aim is to highlight the role of sequence duplication on transcriptional activity and the importance of both in genome evolution.

摘要

序列复制如今被认为是真核生物基因组进化的重要机制,实际上是通过调节转录活性产生适应性多样性的最强大策略之一。与序列复制和差异基因表达同时相关的进化新奇性可统称为复制介导的转录调控。近年来,有证据支持这样一种观点,即序列复制和功能化是在基因组水平起作用的重要进化策略,并且已发现编码序列和非编码序列都是此类事件的靶点。此外,有人提出序列复制的有害影响可能会被内源性细胞机制(如RNA干扰、表观遗传抑制标记)潜在地沉默。按照这些思路,我们的目标是强调序列复制对转录活性的作用以及两者在基因组进化中的重要性。

相似文献

1
The Role of Sequence Duplication in Transcriptional Regulation and Genome Evolution.序列重复在转录调控和基因组进化中的作用。
Curr Genomics. 2019 Sep;20(6):405-408. doi: 10.2174/1389202920666190320140721.
2
Recurrent Gene Duplication Diversifies Genome Defense Repertoire in Drosophila.重复基因复制使果蝇的基因组防御库多样化。
Mol Biol Evol. 2016 Jul;33(7):1641-53. doi: 10.1093/molbev/msw053. Epub 2016 Mar 14.
3
Transgene silencing by the host genome defense: implications for the evolution of epigenetic control mechanisms in plants and vertebrates.宿主基因组防御导致的转基因沉默:对植物和脊椎动物表观遗传控制机制进化的影响
Plant Mol Biol. 2000 Jun;43(2-3):401-15. doi: 10.1023/a:1006484806925.
4
Detecting functional divergence after gene duplication through evolutionary changes in posttranslational regulatory sequences.通过翻译后调控序列的进化变化检测基因复制后的功能分化。
PLoS Comput Biol. 2014 Dec 4;10(12):e1003977. doi: 10.1371/journal.pcbi.1003977. eCollection 2014 Dec.
5
Polymorphic duplicate genes and persistent non-coding sequences reveal heterogeneous patterns of mitochondrial DNA loss in salamanders.多态性重复基因和持久的非编码序列揭示了蝾螈中线粒体 DNA 丢失的异质模式。
BMC Genomics. 2017 Dec 28;18(1):992. doi: 10.1186/s12864-017-4358-2.
6
The Phenotypic Plasticity of Duplicated Genes in Saccharomyces cerevisiae and the Origin of Adaptations.酿酒酵母中重复基因的表型可塑性与适应性的起源
G3 (Bethesda). 2017 Jan 5;7(1):63-75. doi: 10.1534/g3.116.035329.
7
The birth of new genes by RNA- and DNA-mediated duplication during mammalian evolution.在哺乳动物进化过程中通过RNA和DNA介导的复制产生新基因。
J Comput Biol. 2009 Oct;16(10):1429-44. doi: 10.1089/cmb.2009.0073.
8
A Tale of Genome Compartmentalization: The Evolution of Virulence Clusters in Smut Fungi.基因组区室化的故事:黑粉菌中毒力簇的进化
Genome Biol Evol. 2016 Feb 12;8(3):681-704. doi: 10.1093/gbe/evw026.
9
Evolutionary dynamics and functional specialization of plant paralogs formed by whole and small-scale genome duplications.由全基因组和小尺度基因组复制形成的植物直系同源基因的进化动态和功能特化。
Mol Biol Evol. 2012 Nov;29(11):3541-51. doi: 10.1093/molbev/mss162. Epub 2012 Jun 24.
10
Origin and evolution of ubiquitin-conjugating enzymes from Guillardia theta nucleomorph to hominoid.从 Guillardia theta 核质体到类人猿泛素缀合酶的起源与进化
Gene. 2009 Nov 15;447(2):72-85. doi: 10.1016/j.gene.2009.07.021. Epub 2009 Aug 5.

引用本文的文献

1
Genetic framework sequencing analysis of Candida tropicalis in dairy cow mastitis and study of pathogenicity and drug resistance.奶牛乳腺炎中热带假丝酵母菌的遗传框架测序分析及致病性和耐药性研究。
BMC Microbiol. 2024 Oct 23;24(1):428. doi: 10.1186/s12866-024-03522-y.
2
Genome-Wide Identification of Rubber Tree Genes and Functional Characterization of .橡胶树基因的全基因组鉴定及……的功能特性分析
Plants (Basel). 2024 Sep 29;13(19):2729. doi: 10.3390/plants13192729.
3
Pleiotropic fitness effects of a Drosophila odorant-binding protein.果蝇气味结合蛋白的多效适合度效应。
G3 (Bethesda). 2023 Feb 9;13(2). doi: 10.1093/g3journal/jkac307.
4
Integration of Maps Enables a Cytogenomics Analysis of the Complete Karyotype in .图谱整合使全基因组染色体组分析成为可能。
Int J Mol Sci. 2022 May 11;23(10):5353. doi: 10.3390/ijms23105353.
5
The Critical Role of Epigenetic Regulation in Developmental Programming of Higher Organisms.表观遗传调控在高等生物发育编程中的关键作用
Curr Genomics. 2019 Sep;20(6):403-404. doi: 10.2174/138920292006191206141546.

本文引用的文献

1
Multigenome analysis implicates miniature inverted-repeat transposable elements (MITEs) in metabolic diversification in eudicots.多基因组分析表明微型反向重复转座元件(MITEs)在真双子叶植物代谢多样化中的作用。
Proc Natl Acad Sci U S A. 2018 Jul 10;115(28):E6650-E6658. doi: 10.1073/pnas.1721318115. Epub 2018 Jun 25.
2
Transposable elements generate regulatory novelty in a tissue-specific fashion.转座元件以组织特异性的方式产生调控新元件。
BMC Genomics. 2018 Jun 18;19(1):468. doi: 10.1186/s12864-018-4850-3.
3
Genome-Wide Analysis of the Association of Transposable Elements with Gene Regulation Suggests that Alu Elements Have the Largest Overall Regulatory Impact.转座元件与基因调控关联的全基因组分析表明,Alu元件具有最大的总体调控影响。
J Comput Biol. 2018 Jun;25(6):551-562. doi: 10.1089/cmb.2017.0228. Epub 2018 Apr 30.
4
MicroRNA duplication accelerates the recruitment of new targets during vertebrate evolution.微小 RNA 复制在脊椎动物进化过程中加速了新靶标的招募。
RNA. 2018 Jun;24(6):787-802. doi: 10.1261/rna.062752.117. Epub 2018 Mar 6.
5
Biology of Retrotransposons: From an Enzymatic to a Structural Point of View.逆转录转座子生物学:从酶学角度到结构角度
Curr Genomics. 2018 Feb;19(2):110-118. doi: 10.2174/1389202918666170815150738.
6
Gene duplication and dosage effects during the early emergence of C4 photosynthesis in the grass genus Alloteropsis.在禾本科异颖草属植物 C4 光合作用的早期进化中,基因复制和剂量效应。
J Exp Bot. 2018 Apr 9;69(8):1967-1980. doi: 10.1093/jxb/ery029.
7
The house spider genome reveals an ancient whole-genome duplication during arachnid evolution.家蛛基因组揭示了蛛形动物进化过程中的一次古老的全基因组复制事件。
BMC Biol. 2017 Jul 31;15(1):62. doi: 10.1186/s12915-017-0399-x.
8
The evolution of duplicate gene expression in mammalian organs.哺乳动物器官中重复基因表达的进化。
Genome Res. 2017 Sep;27(9):1461-1474. doi: 10.1101/gr.215566.116. Epub 2017 Jul 25.
9
Paralogous Genes Modulate Th2 Cell Function during Chronic Allergic Inflammation via Regulation of .旁系同源基因通过对……的调控在慢性过敏性炎症过程中调节Th2细胞功能。
J Immunol. 2017 Jul 15;199(2):501-509. doi: 10.4049/jimmunol.1601826. Epub 2017 Jun 2.
10
Evolution of Two Short Interspersed Elements in Callorhinchus milii (Chondrichthyes, Holocephali) and Related Elements in Sharks and the Coelacanth.澳洲鬼蝠魟(银鲛目,全头亚纲)中两个短散在元件的进化以及鲨鱼和腔棘鱼中的相关元件
Genome Biol Evol. 2017 Jun 1;9(6):1406-17. doi: 10.1093/gbe/evx094.