Institute for Solid State Physics and Optics, Wigner Research Centre for Physics, 1121 Budapest, Hungary.
Institute of Enzymology, Research Centre for Natural Sciences, 1117 Budapest, Hungary.
Int J Mol Sci. 2020 Jun 3;21(11):3997. doi: 10.3390/ijms21113997.
The potential barriers governing the motions of -synuclein (S) variants' hydration water, especially energetics of them, is in the focus of the work. The thermodynamical approach yielded essential information about distributions and heights of the potential barriers. The proteins' structural disorder was measured by ratios of heterogeneous water-binding interfaces. They showed the S monomers, oligomers and amyloids to possess secondary structural elements, although monomers are intrinsically disordered. Despite their disordered nature, monomers have 33% secondary structure, and therefore they are more compact than a random coil. At the lowest potential barriers with mobile hydration water, monomers are already functional, a monolayer of mobile hydration water is surrounding them. Monomers realize all possible hydrogen bonds with the solvent water. S oligomers and amyloids have half of the mobile hydration water amount than monomers because aggregation involves less mobile hydration. The solvent-accessible surface of the oligomers is ordered or homogenous in its interactions with water to 66%. As a contrast, S amyloids are disordered or heterogeneous to 75% of their solvent accessible surface and both wild type and A53T amyloids show identical, low-level hydration. Mobile water molecules in the first hydration shell of amyloids are the weakest bound compared to other forms.
工作重点是研究 -突触核蛋白(S)变体水合作用的潜在障碍,特别是它们的能量学。热力学方法提供了有关势能障碍分布和高度的重要信息。通过异质水结合界面的比例来测量蛋白质的结构无序性。结果表明,S 单体、寡聚体和淀粉样蛋白具有二级结构元件,尽管单体本身是无规卷曲的。尽管它们无序,单体仍有 33%的二级结构,因此比无规卷曲更紧凑。在具有可移动水合作用的最低势能障碍下,单体已经具有功能,一层可移动的水合作用围绕着它们。单体与溶剂水实现了所有可能的氢键。S 寡聚体和淀粉样蛋白的可移动水合作用量比单体少一半,因为聚集涉及的可移动水合作用较少。寡聚体的溶剂可及表面与水的相互作用有序或均匀,达到 66%。相比之下,S 淀粉样蛋白的溶剂可及表面有 75%是无序或不均匀的,野生型和 A53T 淀粉样蛋白都显示出相同的、低水平的水合作用。与其他形式相比,淀粉样蛋白第一层水合壳中的可移动水分子结合得最弱。