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金属酶介导的碳-氟键断裂。

Carbon-fluorine bond cleavage mediated by metalloenzymes.

机构信息

Department of Chemistry, University of Texas at San Antonio, 1 UTSA Circle, San Antonio, TX 78249, USA.

出版信息

Chem Soc Rev. 2020 Jul 21;49(14):4906-4925. doi: 10.1039/c9cs00740g. Epub 2020 Jun 8.

Abstract

Fluorochemicals are a widely distributed class of compounds and have been utilized across a wide range of industries for decades. Given the environmental toxicity and adverse health threats of some fluorochemicals, the development of new methods for their decomposition is significant to public health. However, the carbon-fluorine (C-F) bond is among the most chemically robust bonds; consequently, the degradation of fluorinated hydrocarbons is exceptionally difficult. Here, metalloenzymes that catalyze the cleavage of this chemically challenging bond are reviewed. These enzymes include histidine-ligated heme-dependent dehaloperoxidase and tyrosine hydroxylase, thiolate-ligated heme-dependent cytochrome P450, and four nonheme oxygenases, namely, tetrahydrobiopterin-dependent aromatic amino acid hydroxylase, 2-oxoglutarate-dependent hydroxylase, Rieske dioxygenase, and thiol dioxygenase. While much of the literature regarding the aforementioned enzymes highlights their ability to catalyze C-H bond activation and functionalization, in many cases, the C-F bond cleavage has been shown to occur on fluorinated substrates. A copper-dependent laccase-mediated system representing an unnatural radical defluorination approach is also described. Detailed discussions on the structure-function relationships and catalytic mechanisms provide insights into biocatalytic defluorination, which may inspire drug design considerations and environmental remediation of halogenated contaminants.

摘要

含氟化合物是一类广泛分布的化合物,几十年来已在众多行业得到广泛应用。鉴于某些含氟化合物的环境毒性和对健康的不良威胁,开发新的方法来分解它们对公众健康具有重要意义。然而,碳-氟(C-F)键是化学稳定性最高的键之一;因此,氟化碳氢化合物的降解非常困难。本文综述了催化这种具有挑战性的化学键断裂的金属酶。这些酶包括组氨酸配位血红素依赖性脱卤过氧化物酶和酪氨酸羟化酶、硫醇配位血红素依赖性细胞色素 P450,以及四种非血红素加氧酶,即四氢生物蝶呤依赖性芳香族氨基酸羟化酶、2-酮戊二酸依赖性羟化酶、 Rieske 双加氧酶和硫醇双加氧酶。尽管上述大多数文献都强调了这些酶催化 C-H 键活化和官能化的能力,但在许多情况下,已经证明 C-F 键的断裂发生在氟化底物上。还描述了一种代表非天然自由基脱氟方法的铜依赖性漆酶介导体系。详细讨论了结构-功能关系和催化机制,为生物催化脱氟提供了深入的了解,这可能为药物设计考虑和卤代污染物的环境修复提供启示。

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本文引用的文献

1
Substrate-Assisted Hydroxylation and -Demethylation in the Peroxidase-like Cytochrome P450 Enzyme CYP121.
ACS Catal. 2020 Jan 17;10(2):1628-1639. doi: 10.1021/acscatal.9b04596. Epub 2019 Dec 20.
2
Structure of a trapped radical transfer pathway within a ribonucleotide reductase holocomplex.
Science. 2020 Apr 24;368(6489):424-427. doi: 10.1126/science.aba6794. Epub 2020 Mar 26.
3
PFAS Water Contamination Examined.
JAMA. 2019 Nov 12;322(18):1757. doi: 10.1001/jama.2019.17263.
4
Studies on the selectivity of proline hydroxylases reveal new substrates including bicycles.
Bioorg Chem. 2020 Jan;94:103386. doi: 10.1016/j.bioorg.2019.103386. Epub 2019 Oct 28.
5
Defluorination of Perfluorooctanoic Acid (PFOA) and Perfluorooctane Sulfonate (PFOS) by sp. Strain A6.
Environ Sci Technol. 2019 Oct 1;53(19):11410-11419. doi: 10.1021/acs.est.9b04047. Epub 2019 Sep 18.
7
Biocatalytic Carbon-Hydrogen and Carbon-Fluorine Bond Cleavage through Hydroxylation Promoted by a Histidyl-Ligated Heme Enzyme.
ACS Catal. 2019 Jun 7;9(6):4764-4776. doi: 10.1021/acscatal.9b00231. Epub 2019 Apr 11.
8
9
The Dark Side of Fluorine.
ACS Med Chem Lett. 2019 Jun 20;10(7):1016-1019. doi: 10.1021/acsmedchemlett.9b00235. eCollection 2019 Jul 11.
10
Conserved N-terminal cysteine dioxygenases transduce responses to hypoxia in animals and plants.
Science. 2019 Jul 5;365(6448):65-69. doi: 10.1126/science.aaw0112.

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