Yuan Feiyan, Su Binbin, Yu Yang, Wang Jiangyun
Institute of Biochemical Engineering, Key Laboratory of Medical Molecule Science and Pharmaceutical Engineering, Ministry of Industry and Information Technology, School of Chemistry and Chemical Engineering, Beijing Institute of Technology Beijing 102488 China
Laboratory of RNA Biology, Institute of Biophysics, Chinese Academy of Sciences Beijing 100101 China
RSC Chem Biol. 2023 May 18;4(6):431-446. doi: 10.1039/d2cb00250g. eCollection 2023 Jun 7.
Radical enzymes harness the power of reactive radical species by placing them in a protein scaffold, and they are capable of catalysing many important reactions. New native radical enzymes, especially those with amino acid-based radicals, in the category of non-heme iron enzymes (including ribonucleotide reductases), heme enzymes, copper enzymes, and FAD-radical enzymes have been discovered and characterized. We discussed recent research efforts to discover new native amino acid-based radical enzymes, and to study the roles of radicals in processes such as enzyme catalysis and electron transfer. Furthermore, design of radical enzymes in a small and simple scaffold not only allows us to study the radical in a well-controlled system and test our understanding of the native enzymes, but also allows us to create powerful enzymes. In the study and design of amino acid-based radical enzymes, the use of unnatural amino acids allows precise control of p values and reduction potentials of the residue, as well as probing the location of the radical through spectroscopic methods, making it a powerful research tool. Our understanding of amino acid-based radical enzymes will allow us to tailor them to create powerful catalysts and better therapeutics.
自由基酶通过将活性自由基物种置于蛋白质支架中来利用其力量,并且它们能够催化许多重要反应。新的天然自由基酶,特别是那些具有基于氨基酸的自由基的酶,已在非血红素铁酶(包括核糖核苷酸还原酶)、血红素酶、铜酶和黄素腺嘌呤二核苷酸(FAD)自由基酶类别中被发现和表征。我们讨论了最近为发现新的基于天然氨基酸的自由基酶以及研究自由基在酶催化和电子转移等过程中的作用所做的研究工作。此外,在小型简单支架中设计自由基酶不仅使我们能够在可控系统中研究自由基并检验我们对天然酶的理解,还使我们能够创造出强大的酶。在基于氨基酸的自由基酶的研究和设计中,使用非天然氨基酸可以精确控制残基的p值和还原电位,以及通过光谱方法探测自由基的位置,使其成为一种强大的研究工具。我们对基于氨基酸的自由基酶的理解将使我们能够对其进行定制,以创造出强大的催化剂和更好的治疗方法。