Wang Z N, Gao W J, Wang B Q, Cao W H, Lv J, Yu C Q, Pang Z C, Cong L M, Wang H, Wu X P, Liu Y, Li L M
Department of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Qingdao Municipal Center for Disease Control and Prevention, Qingdao 266033, Shandong, China.
Beijing Da Xue Xue Bao Yi Xue Ban. 2020 Jun 18;52(3):425-431. doi: 10.19723/j.issn.1671-167X.2020.03.005.
To explore the cytidine-phosphate-guanosine (CPG) sites associated with fas-ting plasma glucose (FPG) and glycated haemoglobin (HbA1c) in twins.
In the study, 169 pairs of monozygotic twins were recruited in Qingdao, Zhejiang, Jiangsu, Sichuan and Heilongjiang in June to December of 2013 and June 2017 to October 2018. The methylation was detected by Illumina Infinium HumanMethylation450 BeadChip and Illumina Infinium MethylationEPIC BeadChip. According to the Linear Mixed Effect model (LME model), fasting plasma glucose and HbA1c were taken as the main effects, the methylation level (β value) was taken as the dependent variable, continuous variables, such as age, body mass index (BMI), blood pressure, components of blood cells, surrogate variables generated by SVA, and categorical variables, such as gender, smoking and drinking status, hypoglycemic drugs taking, were included in the fixed effect model as covariates, and the identity numbers (ID) of the twins was included in the random effect model. The intercept was set as a random. Regression analysis was carried out to find out the CpG sites related to fasting blood glucose or HbA1c, respectively.
In this study, 338 monozygotic twins (169 pairs) were included, with 412 459 CpG loci. Among them, 114 pairs were male, and 55 pairs were female, with an average age of (48.2±11.9) years. After adjustment of age, gender, BMI, blood pressure, smoking, drinking, blood cell composition, and other covariates, and multiple comparison test, 7 CpG sites (cg19693031, cg01538969, cg08501915, cg04816311, ch.8.1820050F, cg06721411, cg26608667) were found related to fasting blood glucose, 3 of which (cg08501915, ch.8.1820050f, cg26608667) were the newly found sites in this study; whereas 10 CpG sites (cg19693031, cg04816311, cg01538969, cg01339781, cg01676795, cg24667115, cg09029192, cg20697417, ch.4.1528651F, cg16097041) were found related to HbA1c, and 4 of which(cg01339781, cg24667115, cg20697417, and ch.4.1528651f) were new. We found that cg19693031 in gene was the lowest -value site in the association analysis between DNA methylation and fas-ting plasma glucose and HbA1c (=2.42×10, <0.001; =1.72×10, <0.001).
In this twin study, we found new CpG sites related to fasting blood glucose and HbA1c, and provided some clues that partly revealed the potential mechanism of blood glucose metabolism in terms of DNA methylation, but it needed further verification in external larger samples.
探索双胞胎中与空腹血糖(FPG)和糖化血红蛋白(HbA1c)相关的胞嘧啶 - 磷酸 - 鸟嘌呤(CPG)位点。
本研究于2013年6月至12月以及2017年6月至2018年10月在青岛、浙江、江苏、四川和黑龙江招募了169对同卵双胞胎。通过Illumina Infinium HumanMethylation450 BeadChip和Illumina Infinium MethylationEPIC BeadChip检测甲基化情况。根据线性混合效应模型(LME模型),将空腹血糖和HbA1c作为主要效应,甲基化水平(β值)作为因变量,年龄、体重指数(BMI)、血压、血细胞成分、SVA生成的替代变量等连续变量以及性别、吸烟和饮酒状况、服用降糖药物等分类变量作为协变量纳入固定效应模型,双胞胎的身份编号(ID)纳入随机效应模型。将截距设为随机变量。分别进行回归分析以找出与空腹血糖或HbA1c相关的CpG位点。
本研究纳入了338名同卵双胞胎(169对),共412459个CpG位点。其中,男性114对,女性55对,平均年龄为(48.2±11.9)岁。在调整年龄、性别、BMI、血压、吸烟、饮酒、血细胞组成等协变量并进行多重比较检验后,发现7个CpG位点(cg19693031、cg01538969、cg08501915、cg04816311、ch.8.1820050F、cg06721411、cg26608667)与空腹血糖相关,其中3个(cg08501915、ch.8.1820050f、cg26608667)是本研究新发现的位点;发现10个CpG位点(cg19693031、cg04816311、cg01538969、cg01339781、cg01676795、cg24667115、cg09029192、cg20697417、ch.4.1528651F、cg16097041)与HbA1c相关,其中4个(cg01339781、cg24667115、cg20697417、ch.4.1528651f)是新发现的。我们发现基因中的cg19693031在DNA甲基化与空腹血糖和HbA1c的关联分析中是最低值位点(=2.42×10,<0.001;=1.72×10,<0.001)。
在这项双胞胎研究中,我们发现了与空腹血糖和HbA1c相关的新CpG位点,并提供了一些线索,部分揭示了DNA甲基化方面血糖代谢的潜在机制,但需要在外部更大样本中进一步验证。