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pH 控制分批发酵过程中碳水化合物的代谢谱

Metabolic Profiles of Carbohydrates in During pH-Controlled Batch Fermentation.

作者信息

Liu Gefei, Qiao Yali, Zhang Yanjiao, Leng Cong, Chen Hongyu, Sun Jiahui, Fan Xuejing, Li Aili, Feng Zhen

机构信息

Key Laboratory of Dairy Science, Ministry of Education, College of Food Science, Northeast Agricultural University, Harbin, China.

出版信息

Front Microbiol. 2020 May 29;11:1131. doi: 10.3389/fmicb.2020.01131. eCollection 2020.

DOI:10.3389/fmicb.2020.01131
PMID:32547529
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7272703/
Abstract

Revealing the metabolic profiles of carbohydrates with their regulatory genes and metabolites is conducive to understanding their mechanism of utilization in MN-ZLW-002 during pH-controlled batch fermentation. Transcriptomics and metabolomics were used to study carbohydrate metabolism. More than 200 unigenes were involved in carbohydrate transport. Of these unigenes, 55 were involved in the phosphotransferase system (PTS), which had higher expression levels than those involved in ABC protein-dependent systems, permeases, and symporters. The expression levels of the genes involved in the carbohydrate transport systems and phosphate transport system were high at the end-lag and end-exponential growth phases, respectively. In addition, 166 differentially expressed genes (DEGs) associated with carbohydrate metabolism were identified. Most genes had their highest expression levels at the end-lag phase. The , , , and genes involved in the glycolytic pathway had higher expression levels at the end-exponential growth phase than the mid-exponential growth phase. The results showed high expression levels of and and reabsorption of extracellular galactose. MN-ZLW-002 can metabolize and utilize galactose. Overall, this comprehensive network of carbohydrate metabolism is useful for further studies of the control of glycolytic pathway during the high-density culture of . .

摘要

揭示碳水化合物与其调控基因和代谢物的代谢谱,有助于理解MN-ZLW-002在pH控制分批发酵过程中的利用机制。转录组学和代谢组学被用于研究碳水化合物代谢。超过200个单基因参与碳水化合物转运。在这些单基因中,55个参与磷酸转移酶系统(PTS),其表达水平高于参与ABC蛋白依赖性系统、通透酶和同向转运体的基因。参与碳水化合物转运系统和磷酸盐转运系统的基因表达水平分别在延迟期末期和指数期末期较高。此外,还鉴定出166个与碳水化合物代谢相关的差异表达基因(DEG)。大多数基因在延迟期末期表达水平最高。参与糖酵解途径的基因、、和在指数期末期的表达水平高于指数期中期。结果表明和的高表达以及细胞外半乳糖的重吸收。MN-ZLW-002能够代谢和利用半乳糖。总体而言,这个碳水化合物代谢的综合网络对于进一步研究在高密度培养期间糖酵解途径的控制是有用的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/017c/7272703/383a116dda1a/fmicb-11-01131-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/017c/7272703/477a77c1702c/fmicb-11-01131-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/017c/7272703/655f562120d4/fmicb-11-01131-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/017c/7272703/c75011b035a3/fmicb-11-01131-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/017c/7272703/383a116dda1a/fmicb-11-01131-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/017c/7272703/477a77c1702c/fmicb-11-01131-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/017c/7272703/655f562120d4/fmicb-11-01131-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/017c/7272703/c75011b035a3/fmicb-11-01131-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/017c/7272703/383a116dda1a/fmicb-11-01131-g004.jpg

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