Chemical Biology Research Group, RIKEN Center for Sustainable Resource Science, Wako-shi, Saitama, Japan.
Department of Chemistry and Biotechnology, Graduate School of Engineering, Tottori University, Tottori, Japan.
J Biol Chem. 2020 Aug 14;295(33):11602-11612. doi: 10.1074/jbc.RA120.013105. Epub 2020 Jun 21.
Many microbial secondary metabolites are produced by multienzyme complexes comprising nonribosomal peptide synthetases (NRPSs) and polyketide synthases (PKSs). The ketosynthase (KS) domains of polyketide synthase normally catalyze the decarboxylative Claisen condensation of acyl and malonyl blocks to extend the polyketide chain. However, the terminal KS domain in tenuazonic acid synthetase 1 (TAS1) from the fungus conducts substrate cyclization. Here, we report on the unique features of the KS domain in TAS1. We observed that this domain is monomeric, not dimeric as is typical for KSs. Analysis of a 1.68-Å resolution crystal structure suggests that the substrate cyclization is triggered via proton abstraction from the active methylene moiety in the substrate by a catalytic His-322 residue. Additionally, we show that TAS1 KS promiscuously accepts aminoacyl substrates and that this promiscuity can be increased by a single amino acid substitution in the substrate-binding pocket of the enzyme. These findings provide insight into a KS domain that accepts the amino acid-containing substrate in an NRPS-PKS hybrid enzyme and provide hints to the substrate cyclization mechanism performed by the KS domain in the biosynthesis of the mycotoxin tenuazonic acid.
许多微生物次生代谢物是由包含非核糖体肽合成酶(NRPSs)和聚酮合酶(PKSs)的多酶复合物产生的。聚酮合酶的酮基合成酶(KS)结构域通常催化酰基和丙二酰基砌块的脱羧克莱森缩合,以延长聚酮链。然而,真菌中来自 的杀虫脒合成酶 1(TAS1)中的末端 KS 结构域进行底物环化。在这里,我们报告了 TAS1 中的 KS 结构域的独特特征。我们观察到该结构域是单体的,而不是二聚体,这是 KS 结构域的典型特征。对分辨率为 1.68Å 的晶体结构的分析表明,通过催化 His-322 残基从底物的活性亚甲基部分抽取质子,引发了底物环化。此外,我们还表明,TAS1 KS 可随意接受氨基酸酰基底物,并且通过酶的底物结合口袋中的单个氨基酸取代可以增加这种随意性。这些发现为接受 NRPS-PKS 杂合酶中含氨基酸底物的 KS 结构域提供了深入了解,并为生物合成杀虫脒毒素过程中 KS 结构域进行的底物环化机制提供了线索。