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非靶向代谢组学揭示人类骨骼肌衰老的生物标志物。

Untargeted metabolomics for uncovering biological markers of human skeletal muscle ageing.

机构信息

MRC-Versus Arthritis Centre for Musculoskeletal Ageing Research, University of Nottingham, Nottingham, UK.

National Institute for Health Research (NIHR) Nottingham Biomedical Research Centre, Nottingham, UK.

出版信息

Aging (Albany NY). 2020 Jun 24;12(13):12517-12533. doi: 10.18632/aging.103513.

Abstract

Ageing compromises skeletal muscle mass and function through poorly defined molecular aetiology. Here we have used untargeted metabolomics using UHPLC-MS to profile muscle tissue from young (=10, 25±4y), middle aged (=18, 50±4y) and older (=18, 70±3y) men and women (50:50). Random Forest was used to prioritise metabolite features most informative in stratifying older age, with potential biological context examined using the prize-collecting Steiner forest algorithm embedded in the PIUMet software, to identify metabolic pathways likely perturbed in ageing. This approach was able to filter a large dataset of several thousand metabolites down to subnetworks of age important metabolites. Identified networks included the common age-associated metabolites such as androgens, (poly)amines/amino acids and lipid metabolites, in addition to some potentially novel ageing related markers such as dihydrothymine and imidazolone-5-proprionic acid. The present study reveals that this approach is a potentially useful tool to identify processes underlying human tissue ageing, and could therefore be utilised in future studies to investigate the links between age predictive metabolites and common biomarkers linked to health and disease across age.

摘要

衰老是通过尚未明确的分子发病机制来损害骨骼肌的质量和功能。在这里,我们使用了 UHPLC-MS 进行非靶向代谢组学分析,以分析来自年轻(=10,25±4 岁)、中年(=18,50±4 岁)和老年(=18,70±3 岁)男性和女性(50:50)的肌肉组织。我们使用随机森林来确定在分层老年方面最具信息量的代谢物特征,使用 PIUMet 软件中嵌入的有奖收集 Steiner 森林算法检查潜在的生物学背景,以识别可能在衰老过程中受到干扰的代谢途径。这种方法能够将几千种代谢物的大型数据集过滤到与年龄相关的重要代谢物的子网中。鉴定出的网络包括常见的与年龄相关的代谢物,如雄激素、(多)胺/氨基酸和脂质代谢物,以及一些潜在的新的与衰老相关的标志物,如二氢胸腺嘧啶和咪唑啉酮-5-丙酸。本研究表明,这种方法是一种识别人类组织衰老相关过程的潜在有用工具,因此可在未来的研究中用于研究与年龄相关的代谢物与与健康和疾病相关的常见生物标志物之间的联系。

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