• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

产色葡萄球菌高效重组甲酸脱氢酶:制备与结晶。

Highly-Active Recombinant Formate Dehydrogenase from Pathogenic Bacterium Staphylococcus aureus: Preparation and Crystallization.

机构信息

Lomonosov Moscow State University, Faculty of Chemistry, Moscow, 119991, Russia.

Bach Institute of Biochemistry, Federal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences, Moscow, 119071, Russia.

出版信息

Biochemistry (Mosc). 2020 Jun;85(6):689-696. doi: 10.1134/S0006297920060061.

DOI:10.1134/S0006297920060061
PMID:32586232
Abstract

These authors contributed equally to the work. NAD+-dependent formate dehydrogenase from Staphylococcus aureus (SauFDH) is one of the key enzymes responsible for the survival of this pathogen in the form of biofilms. 3D structure of the enzyme might be helpful in the search for highly specific SauFDH inhibitors that can be used as antibacterial agents exactly against S. aureus biofilms. Here, we prepared a recombinant SauFDH in Escherichia coli cells with a yield of 1 g target protein per liter medium. The developed procedure for the enzyme purification allowed to obtain 400 mg of homogenous enzyme with 61% yield. The specific activity of the purified recombinant SauFDH was 20 U per mg protein, which was 2 times higher than the previously reported activities of formate dehydrogenases. We also found crystallization conditions in the course of two rounds of optimization and obtained 200- and 40-µm crystals for the SauFDH apo- and holoenzymes, respectively. X-ray analysis using synchrotron X-ray sources produced diffraction data sufficient for solving the three-dimensional structures of the apo- and holoenzymes with the resolution of 2.2 and 2.7 Å, respectively. Crystals of the apo- and holoforms of SauFDH had different crystal space groups, which suggest coenzyme binding in the SauFDH holoenzyme.

摘要

这些作者对这项工作的贡献相同。金黄色葡萄球菌(SauFDH)中的 NAD+依赖性甲酸脱氢酶是负责该病原体在生物膜形式下存活的关键酶之一。该酶的三维结构可能有助于寻找高度特异性的 SauFDH 抑制剂,这些抑制剂可以作为抗细菌剂,专门针对金黄色葡萄球菌生物膜。在这里,我们在大肠杆菌细胞中制备了重组 SauFDH,每升培养基的目标蛋白产量为 1 克。开发的酶纯化程序可获得 400 毫克均质酶,收率为 61%。纯化的重组 SauFDH 的比活性为 20 U/mg 蛋白,比以前报道的甲酸脱氢酶活性高 2 倍。我们还在两轮优化过程中找到了结晶条件,分别获得了 SauFDH 脱辅基酶和全酶的 200-和 40-µm 晶体。使用同步加速器 X 射线源进行的 X 射线分析产生了足以解决脱辅基酶和全酶三维结构的衍射数据,分辨率分别为 2.2 和 2.7 Å。SauFDH 脱辅基酶和全酶的晶体具有不同的晶体空间群,这表明辅酶在 SauFDH 全酶中结合。

相似文献

1
Highly-Active Recombinant Formate Dehydrogenase from Pathogenic Bacterium Staphylococcus aureus: Preparation and Crystallization.产色葡萄球菌高效重组甲酸脱氢酶:制备与结晶。
Biochemistry (Mosc). 2020 Jun;85(6):689-696. doi: 10.1134/S0006297920060061.
2
Study of the structure-function relationship of formate dehydrogenase- an important enzyme for Staphylococcus aureus biofilms by rational design.通过合理设计研究甲酸盐脱氢酶的结构-功能关系-金黄色葡萄球菌生物膜的重要酶。
Biochimie. 2024 Jan;216:194-204. doi: 10.1016/j.biochi.2023.10.016. Epub 2023 Nov 2.
3
Purification and crystallization of the respiratory complex formate dehydrogenase-N from Escherichia coli.来自大肠杆菌的呼吸复合物甲酸脱氢酶-N的纯化与结晶
Acta Crystallogr D Biol Crystallogr. 2002 Jan;58(Pt 1):160-2. doi: 10.1107/s0907444901017723. Epub 2001 Dec 21.
4
High resolution structures of holo and apo formate dehydrogenase.全酶和脱辅基甲酸脱氢酶的高分辨率结构。
J Mol Biol. 1994 Feb 25;236(3):759-85. doi: 10.1006/jmbi.1994.1188.
5
Crystallization and preliminary X-ray diffraction studies of glycerol 3-phosphate cytidylyltransferase from Staphylococcus aureus.金黄色葡萄球菌3-磷酸甘油胞苷转移酶的结晶及初步X射线衍射研究
Acta Crystallogr D Biol Crystallogr. 2001 Jun;57(Pt 6):918-20. doi: 10.1107/s0907444901005212. Epub 2001 May 25.
6
Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft.莫拉克斯氏菌属C-1菌株甲酸脱氢酶的脱辅基和全酶形式的结构:旨在理解结构域间裂隙闭合的机制
Acta Crystallogr D Biol Crystallogr. 2009 Dec;65(Pt 12):1315-25. doi: 10.1107/S0907444909040773. Epub 2009 Nov 17.
7
Pilot scale production and isolation of recombinant NAD+- and NADP+-specific formate dehydrogenases.
Biotechnol Bioeng. 1999 Jul 20;64(2):187-93.
8
High-resolution structures of formate dehydrogenase from Candida boidinii.博伊丁假丝酵母甲酸脱氢酶的高分辨率结构
Protein Sci. 2007 Jun;16(6):1146-56. doi: 10.1110/ps.062741707.
9
Expression, purification, crystallization and preliminary X-ray analysis of the PaaI-like thioesterase SAV0944 from Staphylococcus aureus.金黄色葡萄球菌中类PaaI硫酯酶SAV0944的表达、纯化、结晶及初步X射线分析
Acta Crystallogr F Struct Biol Commun. 2014 Feb;70(Pt 2):244-7. doi: 10.1107/S2053230X14000338. Epub 2014 Jan 22.
10
Crystal structure of NAD-dependent formate dehydrogenase.烟酰胺腺嘌呤二核苷酸(NAD)依赖性甲酸脱氢酶的晶体结构
Eur J Biochem. 1992 Jun 1;206(2):441-52. doi: 10.1111/j.1432-1033.1992.tb16945.x.

引用本文的文献

1
Decoding growth inhibitory associated pathways of xenometal-siderophore antibiotic conjugates in .解码异种金属-铁载体抗生素结合物在……中的生长抑制相关途径 。 (原文句子不完整,推测可能是“Decoding growth inhibitory associated pathways of xenometal-siderophore antibiotic conjugates in bacteria”之类,这里按照完整形式翻译了)
Chem Sci. 2025 Mar 17;16(16):7039-7050. doi: 10.1039/d4sc08509d. eCollection 2025 Apr 16.
2
Quantitative proteomics analysis reveals an important role of the transcriptional regulator UidR in the bacterial biofilm formation of .定量蛋白质组学分析揭示了转录调控因子 UidR 在 细菌生物膜形成中的重要作用。
Front Cell Infect Microbiol. 2024 Mar 22;14:1380747. doi: 10.3389/fcimb.2024.1380747. eCollection 2024.
3
Effect of Additional Amino Acid Replacements on the Properties of Multi-point Mutant Bacterial Formate Dehyderogenase PseFDH SM4S.额外氨基酸替换对多点突变细菌甲酸脱氢酶PseFDH SM4S性质的影响。
Acta Naturae. 2022 Jan-Mar;14(1):82-91. doi: 10.32607/actanaturae.11665.