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浓度依赖的共振测量探究亨廷顿外显子 1 蛋白快速四聚化的动力学。

Kinetics of Fast Tetramerization of the Huntingtin Exon 1 Protein Probed by Concentration-Dependent On-Resonance Measurements.

机构信息

Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892-520, United States.

出版信息

J Phys Chem Lett. 2020 Jul 16;11(14):5643-5648. doi: 10.1021/acs.jpclett.0c01636. Epub 2020 Jul 1.

DOI:10.1021/acs.jpclett.0c01636
PMID:32589032
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7377354/
Abstract

An approach for the quantitative description of the kinetics of very fast exchange processes (τ < 50-100 μs) associated with transient, reversible protein oligomerization, is presented. We show that on-resonance N- measurements conducted as a function of protein concentration at several spin-lock radio frequency field strengths are indispensable for unambiguous determination of the rate constants for interconversion between monomeric and higher order oligomeric species. The approach is experimentally demonstrated on the study of fast, reversible tetramerization of the full-length Huntingtin exon 1 protein, htt, responsible for Huntington's disease. Incorporation of concentration-dependent N- data, obtained from on-resonance measurements performed at three spin-lock field strengths, into analysis of the kinetic scheme describing reversible tetramerization of htt allowed us to uniquely determine the rate constants of interconversion between the various species. This approach serves as a valuable complement to the existing array of NMR techniques for studying early, transient oligomerization events in protein aggregation pathways.

摘要

本文提出了一种用于定量描述与瞬态、可逆蛋白质寡聚化相关的非常快速交换过程(τ < 50-100 μs)的动力学的方法。我们表明,在几个自旋锁定射频场强度下作为蛋白质浓度函数进行的共振 N-测量对于明确确定单体和更高阶寡聚体之间的转化速率常数是必不可少的。该方法在研究全长 Huntingtin 外显子 1 蛋白 htt(导致亨廷顿病)的快速、可逆四聚化的研究中得到了实验验证。将在三个自旋锁定场强度下进行的共振测量获得的浓度依赖性 N-数据纳入描述 htt 可逆四聚化的动力学方案的分析中,使我们能够唯一地确定各种物种之间的转化速率常数。该方法为研究蛋白质聚集途径中早期瞬态寡聚化事件的现有一系列 NMR 技术提供了有价值的补充。

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本文引用的文献

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Abrogation of prenucleation, transient oligomerization of the Huntingtin exon 1 protein by human profilin I.人原肌球蛋白 I 对亨廷顿蛋白外显子 1 蛋白的预核前断裂和瞬时寡聚化作用的消除。
Proc Natl Acad Sci U S A. 2020 Mar 17;117(11):5844-5852. doi: 10.1073/pnas.1922264117. Epub 2020 Mar 3.
2
Probing initial transient oligomerization events facilitating Huntingtin fibril nucleation at atomic resolution by relaxation-based NMR.基于弛豫的 NMR 技术在原子分辨率下探测促进 Huntingtin 纤维成核的初始短暂寡聚化事件。
Proc Natl Acad Sci U S A. 2019 Feb 26;116(9):3562-3571. doi: 10.1073/pnas.1821216116. Epub 2019 Feb 11.
3
Self-Assembly of Human Profilin-1 Detected by Carr-Purcell-Meiboom-Gill Nuclear Magnetic Resonance (CPMG NMR) Spectroscopy.通过卡尔-珀塞尔-梅博姆-吉尔核磁共振(CPMG NMR)光谱法检测人原肌球蛋白-1的自组装
Biochemistry. 2017 Feb 7;56(5):692-703. doi: 10.1021/acs.biochem.6b01263. Epub 2017 Jan 20.
4
General expressions for R relaxation for N-site chemical exchange and the special case of linear chains.N 位点化学交换的 R 弛豫的一般表达式以及线性链的特殊情况。
J Magn Reson. 2017 Jan;274:36-45. doi: 10.1016/j.jmr.2016.10.015. Epub 2016 Oct 27.
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Huntington disease.亨廷顿舞蹈病。
Nat Rev Dis Primers. 2015 Apr 23;1:15005. doi: 10.1038/nrdp.2015.5.
6
Allosteric switch regulates protein-protein binding through collective motion.变构开关通过协同运动调节蛋白质-蛋白质结合。
Proc Natl Acad Sci U S A. 2016 Mar 22;113(12):3269-74. doi: 10.1073/pnas.1519609113. Epub 2016 Mar 9.
7
Super-resolution fluorescence of huntingtin reveals growth of globular species into short fibers and coexistence of distinct aggregates.亨廷顿蛋白的超分辨率荧光显示球状物质生长为短纤维以及不同聚集体的共存。
ACS Chem Biol. 2014 Dec 19;9(12):2767-78. doi: 10.1021/cb500335w. Epub 2014 Oct 20.
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Chemical exchange in biomacromolecules: past, present, and future.生物大分子中的化学交换:过去、现在与未来。
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9
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