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新种,来自有毒海洋甲藻的藻际微生物群。

sp. nov., from phycosphere microbiota of toxic marine dinoflagellate .

作者信息

Jiang Zhiwei, Duan Yuhan, Yang Xi, Yao Bing, Zeng Teer, Wang Xiaoyan, Feng Qi, Qi Min, Yang Qiao, Zhang Xiaoling

机构信息

ABI Group of GPM Project, Department of Environmental Science and Engineering, Zhejiang Ocean University, Zhoushan 316021, PR China.

Innovation Laboratory of Systems Microbiology and Synthetic Biology, Institute of Animal Science, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, PR China.

出版信息

Int J Syst Evol Microbiol. 2020 Jul;70(7):4390-4397. doi: 10.1099/ijsem.0.004302.

Abstract

A taxonomic study was carried out on a novel algae-associated bacterial strain Z3-1, which was isolated from phycosphere microbiota of toxic marine dinoflagellate 880. Cells of strain Z3-1 were Gram-stain-negative, rod-shaped and strictly aerobic and were motile by means of flagella. Strain Z3-1 grew at 25-42 °C, pH 5.0-10.0 and 1.0-5.0 % (w/v) NaCl. Strain Z3-1 reduced nitrate to nitrite, but did not reduce nitrite to nitrogen gas. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain Z3-1 belongs to the genus showing the highest sequence similarity (97.0 %) to JCM 14935. The average nucleotide identity and digital DNA-DNA hybridization relatedness between strain Z3-1 and type strains of genus with available genome sequences were in the ranges of 72.4-74.4 % and 22.7-23.3 %, respectively. The major fatty acids were summed in feature 8 (C 7c and/or C 6c), C 8c cyclo, C 7c 11-metyl and iso-C. The major polar lipids were determined as diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, two unidentified phospholipids and four unidentified polar lipids. The genomic DNA G+C content calculated from genome sequence was 65.6 mol%. Based on genotypic, chemotaxonomic and phenotypic data obtained, strain Z3-1 represents a novel species of the genus , for which the name sp. nov. is proposed with the type strain Z3-1 (=KCTC 62458=CCTCC AB 2017227).

摘要

对一株新型藻类相关细菌菌株Z3-1进行了分类学研究,该菌株从有毒海洋甲藻880的藻际微生物群中分离得到。菌株Z3-1的细胞革兰氏染色阴性,呈杆状,严格需氧,靠鞭毛运动。菌株Z3-1在25-42℃、pH 5.0-10.0和1.0-5.0%(w/v)NaCl条件下生长。菌株Z3-1能将硝酸盐还原为亚硝酸盐,但不能将亚硝酸盐还原为氮气。基于16S rRNA基因序列的系统发育分析表明,菌株Z3-1属于该属,与JCM 14935的序列相似性最高(97.0%)。菌株Z3-1与具有可用基因组序列的该属模式菌株之间的平均核苷酸同一性和数字DNA-DNA杂交相关性分别在72.4-74.4%和22.7-23.3%范围内。主要脂肪酸为特征8(C 7c和/或C 6c)、C 8c环、C 7c 11-甲基和异-C。主要极性脂确定为双磷脂酰甘油、磷脂酰胆碱、磷脂酰乙醇胺、磷脂酰甘油、两种未鉴定的磷脂和四种未鉴定的极性脂。根据基因组序列计算的基因组DNA G+C含量为65.6 mol%。基于获得的基因型、化学分类学和表型数据,菌株Z3-1代表该属的一个新物种,为此提出新名称sp. nov.,模式菌株为Z3-1(=KCTC 62458=CCTCC AB 2017227)。

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