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在随机温度与恒定温度下的先前进化会影响RNA病毒在极端温度下的进化能力。

Prior evolution in stochastic versus constant temperatures affects RNA virus evolvability at a thermal extreme.

作者信息

Gloria-Soria Andrea, Mendiola Sandra Y, Morley Valerie J, Alto Barry W, Turner Paul E

机构信息

Department of Ecology and Evolutionary Biology Yale University New Haven CT USA.

Present address: Department of Environmental Sciences, Center for Vector Biology and Zoonotic Diseases The Connecticut Agricultural Experiment Station New Haven CT USA.

出版信息

Ecol Evol. 2020 Apr 29;10(12):5440-5450. doi: 10.1002/ece3.6287. eCollection 2020 Jun.

DOI:10.1002/ece3.6287
PMID:32607165
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7319105/
Abstract

It is unclear how historical adaptation versus maladaptation in a prior environment affects population evolvability in a novel habitat. Prior work showed that vesicular stomatitis virus (VSV) populations evolved at constant 37°C improved in cellular infection at both 29°C and 37°C; in contrast, those evolved under random changing temperatures between 29°C and 37°C failed to improve. Here, we tested whether prior evolution affected the rate of adaptation at the thermal-niche edge: 40°C. After 40 virus generations in the new environment, we observed that populations historically evolved at random temperatures showed greater adaptability. Deep sequencing revealed that most of the newly evolved mutations were de novo. Also, two novel evolved mutations in the VSV glycoprotein and replicase genes tended to co-occur in the populations previously evolved at constant 37°C, whereas this parallelism was not seen in populations with prior random temperature evolution. These results suggest that prior adaptation under constant versus random temperatures constrained the mutation landscape that could improve fitness in the novel 40°C environment, perhaps owing to differing epistatic effects of new mutations entering genetic architectures that earlier diverged. We concluded that RNA viruses maladapted to their previous environment could "leapfrog" over counterparts of higher fitness, to achieve faster adaptability in a novel environment.

摘要

尚不清楚先前环境中的历史适应性与不适应性如何影响新栖息地中种群的进化能力。先前的研究表明,在37°C恒温下进化的水疱性口炎病毒(VSV)种群在29°C和37°C时的细胞感染能力均有所提高;相比之下,在29°C至37°C之间随机变化的温度下进化的种群则没有改善。在这里,我们测试了先前的进化是否影响了在热生态位边缘(40°C)的适应速率。在新环境中经过40代病毒传代后,我们观察到历史上在随机温度下进化的种群表现出更大的适应性。深度测序显示,大多数新进化的突变是从头产生的。此外,VSV糖蛋白和复制酶基因中的两个新进化突变倾向于在先前在37°C恒温下进化的种群中同时出现,而在先前经历随机温度进化的种群中则没有这种平行现象。这些结果表明,在恒定温度与随机温度下的先前适应性限制了能够在新的40°C环境中提高适应性的突变格局,这可能是由于进入早期分化的遗传结构的新突变具有不同的上位效应。我们得出结论,对先前环境适应不良的RNA病毒可以“超越”适应性更强的同类病毒,从而在新环境中实现更快的适应性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3958/7319105/f47aca62c60a/ECE3-10-5440-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3958/7319105/07c264aa0f56/ECE3-10-5440-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3958/7319105/3fc9a7957687/ECE3-10-5440-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3958/7319105/f47aca62c60a/ECE3-10-5440-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3958/7319105/07c264aa0f56/ECE3-10-5440-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3958/7319105/3fc9a7957687/ECE3-10-5440-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3958/7319105/f47aca62c60a/ECE3-10-5440-g003.jpg

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