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灰熊健康蛋白质生物标志物的开发与验证

Development and validation of protein biomarkers of health in grizzly bears.

作者信息

Wilson Abbey E, Michaud Sarah A, Jackson Angela M, Stenhouse Gordon, Coops Nicholas C, Janz David M

机构信息

Department of Veterinary Biomedical Sciences, University of Saskatchewan, 44 Campus Drive, Saskatoon, Saskatchewan S7N 5B3, Canada.

The University of Victoria Genome BC Proteomics Centre, 4464 Markham St #3101, Victoria, British Columbia V8Z 7X8, Canada.

出版信息

Conserv Physiol. 2020 Jun 24;8(1):coaa056. doi: 10.1093/conphys/coaa056. eCollection 2020.

Abstract

Large carnivores play critical roles in the maintenance and function of natural ecosystems; however, the populations of many of these species are in decline across the globe. Therefore, there is an urgent need to develop novel techniques that can be used as sensitive conservation tools to detect new threats to the health of individual animals well in advance of population-level effects. Our study aimed to determine the expression of proteins related to energetics, reproduction and stress in the skin of grizzly bears () using a liquid chromatography and multiple reaction monitoring mass spectrometry assay. We hypothesized that a suite of target proteins could be measured using this technique and that the expression of these proteins would be associated with biological (sex, age, sample location on body) and environmental (geographic area, season, sample year) variables. Small skin biopsies were collected from free-ranging grizzly bears in Alberta, Canada, from 2013 to 2019 (n = 136 samples from 111 individuals). Over 700 proteins were detected in the skin of grizzly bears, 19 of which were chosen as targets because of their established roles in physiological function. Generalized linear mixed model analysis was used for each target protein. Results indicate that sample year influenced the majority of proteins, suggesting that physiological changes may be driven in part by responses to changes in the environment. Season influenced the expression of proteins related to energetics, reproduction and stress, all of which were lower during fall compared to early spring. The expression of proteins related to energetics and stress varied by geographic area, while the majority of proteins that were affected by biological attributes (age class, sex and age class by sex interaction) were related to reproduction and stress. This study provides a novel method by which scientists and managers can further assess and monitor physiological function in wildlife.

摘要

大型食肉动物在自然生态系统的维持和功能中发挥着关键作用;然而,全球许多此类物种的数量正在下降。因此,迫切需要开发新的技术,这些技术可以用作灵敏的保护工具,在种群水平受到影响之前很早就检测到对个体动物健康的新威胁。我们的研究旨在使用液相色谱和多反应监测质谱分析法,确定灰熊( )皮肤中与能量代谢、繁殖和应激相关的蛋白质表达。我们假设可以使用该技术测量一组目标蛋白质,并且这些蛋白质的表达将与生物学(性别、年龄、身体上的采样位置)和环境(地理区域、季节、采样年份)变量相关。2013年至2019年期间,从加拿大艾伯塔省自由放养的灰熊身上采集了小皮肤活检样本(来自111只个体的136个样本)。在灰熊的皮肤中检测到700多种蛋白质,其中19种因其在生理功能中的既定作用而被选为目标。对每种目标蛋白质使用广义线性混合模型分析。结果表明,采样年份影响了大多数蛋白质,这表明生理变化可能部分是由对环境变化的反应驱动的。季节影响了与能量代谢、繁殖和应激相关的蛋白质表达,与早春相比,秋季所有这些蛋白质的表达都较低。与能量代谢和应激相关的蛋白质表达因地理区域而异,而受生物学属性(年龄组、性别以及年龄组与性别的相互作用)影响的大多数蛋白质与繁殖和应激有关。这项研究提供了一种新方法,科学家和管理人员可以通过该方法进一步评估和监测野生动物的生理功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bec/7311831/db16e7ad94db/coaa056f1.jpg

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