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Online optimal experimental re-design in robotic parallel fed-batch cultivation facilities.机器人并行补料分批培养设施中的在线优化实验重新设计
Biotechnol Bioeng. 2017 Mar;114(3):610-619. doi: 10.1002/bit.26192. Epub 2016 Dec 13.
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Growth-rate dependency of de novo resveratrol production in chemostat cultures of an engineered Saccharomyces cerevisiae strain.工程酿酒酵母菌株恒化器培养中白藜芦醇从头合成的生长速率依赖性
Microb Cell Fact. 2015 Sep 14;14:133. doi: 10.1186/s12934-015-0321-6.
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Advanced continuous cultivation methods for systems microbiology.用于系统微生物学的先进连续培养方法。
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A novel milliliter-scale chemostat system for parallel cultivation of microorganisms in stirred-tank bioreactors.一种用于在搅拌罐式生物反应器中并行培养微生物的新型毫升规模恒化器系统。
J Biotechnol. 2015 Sep 20;210:19-24. doi: 10.1016/j.jbiotec.2015.06.402. Epub 2015 Jun 23.
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Bioprocess automation on a Mini Pilot Plant enables fast quantitative microbial phenotyping.小型中试工厂的生物过程自动化可实现快速定量微生物表型分析。
Microb Cell Fact. 2015 Mar 11;14:32. doi: 10.1186/s12934-015-0216-6.
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Toward Microbioreactor Arrays: A Slow-Responding Oxygen Sensor for Monitoring of Microbial Cultures in Standard 96-Well Plates.迈向微生物反应器阵列:一种用于监测标准96孔板中微生物培养物的慢响应氧气传感器。
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The development and application of high throughput cultivation technology in bioprocess development.高通量培养技术在生物工艺开发中的发展与应用。
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In Pichia pastoris, growth rate regulates protein synthesis and secretion, mating and stress response.在巴斯德毕赤酵母中,生长速率调节蛋白质合成与分泌、交配及应激反应。
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Specific growth rate and substrate dependent polyhydroxybutyrate production in Saccharomyces cerevisiae.在酿酒酵母中,比生长速率和基质依赖性聚羟基丁酸酯的生产。
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Correlation of cell growth and heterologous protein production by Saccharomyces cerevisiae.酵母细胞生长与异源蛋白表达的相关性研究。
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在小型平行补料分批培养中检测生长速率依赖性产物形成

Detection of growth rate-dependent product formation in miniaturized parallel fed-batch cultivations.

作者信息

Glauche Florian, Glazyrina Julia, Cruz Bournazou Mariano Nicolas, Kiesewetter Gregor, Cuda Fabian, Goelling Detlef, Raab Andreas, Lang Christine, Neubauer Peter

机构信息

Chair of Bioprocess Engineering Technische Universität Berlin Berlin Germany.

Organobalance GmbH Berlin Germany.

出版信息

Eng Life Sci. 2017 Aug 29;17(11):1215-1220. doi: 10.1002/elsc.201600029. eCollection 2017 Nov.

DOI:10.1002/elsc.201600029
PMID:32624749
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6999230/
Abstract

is a popular expression system for recombinant proteins. In most cases, production processes are performed as carbon-limited fed-batch cultures to avoid aerobic ethanol formation. Especially for constitutive expression systems, the specific product formation rate depends on the specific growth rate. The development of optimal feeding strategies strongly depends on laboratory-scale cultivations, which are time and resource consuming, especially when continuous experiments are carried out. It is therefore beneficial for accelerated process development to look at alternatives. In this study, AH22 secreting a heterologous endo-polygalacturonase (EPG) was characterized in microwell plates with an enzyme-based fed-batch medium. Through variation of the glucose release rate, different growth profiles were established and the impact on EPG secretion was analyzed. Product formation rates of 200-400 U (g h) were determined. As a reference, bioreactor experiments using the change-stat cultivation technique were performed. The growth-dependent product formation was analyzed over dilution rates of = 0.01-0.35 with smooth change of at a rate of 0.003 h. EPG production was found to be comparable with a of 400 U (g h) at = 0.27 h. The presented results indicate that parallel miniaturized fed-batch cultures can be applied to determine product formation profiles of putative production strains. With further automation and parallelization of the concept, strain characterization can be performed in shorter time.

摘要

是一种用于重组蛋白的常用表达系统。在大多数情况下,生产过程以碳限制补料分批培养的方式进行,以避免有氧乙醇的形成。特别是对于组成型表达系统,特定产物形成速率取决于特定生长速率。最佳补料策略的开发强烈依赖于实验室规模的培养,这既耗时又耗资源,尤其是在进行连续实验时。因此,寻找替代方法有利于加速工艺开发。在本研究中,使用基于酶的补料分批培养基在微孔板中对分泌异源内切多聚半乳糖醛酸酶(EPG)的AH22进行了表征。通过改变葡萄糖释放速率,建立了不同的生长曲线,并分析了其对EPG分泌的影响。测定了200 - 400 U/(g·h)的产物形成速率。作为参考,使用变化统计培养技术进行了生物反应器实验。在稀释率D = 0.01 - 0.35且D以0.003 h⁻¹的速率平稳变化的条件下,分析了生长依赖性产物形成。发现在D = 0.27 h⁻¹时,EPG产量与400 U/(g·h)相当。所呈现的结果表明,平行小型化补料分批培养可用于确定假定生产菌株的产物形成曲线。随着该概念的进一步自动化和平行化,菌株表征可在更短时间内完成。