Helmholtz Institute for Functional Marine Biodiversity At the University of Oldenburg, Ammerländer Heerstraße 231, 23129, Oldenburg, Germany.
Department of Functional Ecology, Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Am Handelshafen 12, 27570, Bremerhaven, Germany.
BMC Ecol. 2020 Jul 8;20(1):37. doi: 10.1186/s12898-020-00308-4.
Species distribution models are commonly used tools to describe diversity patterns and support conservation measures. There is a wide range of approaches to developing SDMs, each highlighting different characteristics of both the data and the ecology of the species or assemblages represented by the data. Yet, signals of species co-occurrences in community data are usually ignored, due to the assumption that such structuring roles of species co-occurrences are limited to small spatial scales and require experimental studies to be detected. Here, our aim is to explore associations among marine sandy-bottom sediment inhabitants and test for the structuring effect of seagrass on co-occurrences among these species across a New Zealand intertidal sandflat, using a joint species distribution model (JSDM).
We ran a JSDM on a total of 27 macrobenthic species co-occurring in 300,000 m of sandflat. These species represented all major taxonomic groups, i.e. polychaetes, bivalves and crustaceans, collected in 400 sampling locations. A number of significant co-occurrences due to shared habitat preferences were present in vegetated areas, where negative and positive correlations were approximately equally common. A few species, among them the gastropods Cominella glandiformis and Notoacmea scapha, co-occurred randomly with other seagrass benthic inhabitants. Residual correlations were less apparent and mostly positive. In bare sand flats shared habitat preferences resulted in many significant co-occurrences of benthic species. Moreover, many negative and positive residual patterns between benthic species remained after accounting for habitat preferences. Some species occurring in both habitats showed similarities in their correlations, such as the polychaete Aglaophamus macroura, which shared habitat preferences with many other benthic species in both habitats, yet no residual correlations remained in either habitat.
Firstly, analyses based on a latent variable approach to joint distributions stressed the structuring role of species co-occurrences beyond experimental scales. Secondly, results showed context dependent interactions, highlighted by species having more interconnected networks in New Zealand bare sediment sandflats than in seagrass meadows. These findings stress the critical importance of natural history to modelling, as well as incorporating ecological reality in SDMs.
物种分布模型是一种常用的工具,用于描述多样性模式并支持保护措施。开发 SDM 的方法有很多种,每种方法都强调了数据和所代表物种或生物组合的生态学的不同特征。然而,由于假设物种共同出现的结构作用仅限于小的空间尺度,并且需要通过实验研究来检测,因此社区数据中的物种共同出现信号通常被忽略。在这里,我们的目的是探索新西兰潮间带沙滩上的海洋砂底沉积物居民之间的关联,并通过联合物种分布模型 (JSDM) 测试海草对这些物种共同出现的结构作用。
我们对在 30 万平方公尺的沙滩上共同出现的 27 种大型底栖生物进行了 JSDM 分析。这些物种代表了所有主要的分类群,即多毛类、双壳类和甲壳类,在 400 个采样点采集。在有植被的区域存在许多由于共同的栖息地偏好而导致的显著共同出现,其中负相关和正相关几乎同样常见。少数几种物种,包括腹足纲 Cominella glandiformis 和 Notoacmea scapha,与其他海草底栖生物随机共同出现。残余相关性不太明显,且主要为正相关。在裸露的沙滩上,共同的栖息地偏好导致许多底栖物种存在显著的共同出现。此外,在考虑到栖息地偏好后,底栖物种之间仍然存在许多负相关和正相关的残余模式。在两种生境中都存在的一些物种在其相关性方面表现出相似性,例如多毛纲 Aglaophamus macroura,它与两种生境中的许多其他底栖物种都有共同的栖息地偏好,但在两种生境中都没有剩余相关性。
首先,基于联合分布的潜在变量方法的分析强调了物种共同出现的结构作用超出了实验尺度。其次,结果表明存在依赖于环境的相互作用,突出表现在新西兰裸露沉积物沙滩上的物种比海草草地中的物种具有更多相互关联的网络。这些发现强调了自然历史对建模的重要性,以及在 SDM 中纳入生态现实的重要性。