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从用户可信度和经验评估的在线健康讨论中发现神经副作用。

Neural side effect discovery from user credibility and experience-assessed online health discussions.

机构信息

School of Computing, National University of Singapore, 13 Computing Drive, Singapore, 117417, Singapore.

出版信息

J Biomed Semantics. 2020 Jul 8;11(1):5. doi: 10.1186/s13326-020-00221-1.

Abstract

BACKGROUND

Health 2.0 allows patients and caregivers to conveniently seek medical information and advice via e-portals and online discussion forums, especially regarding potential drug side effects. Although online health communities are helpful platforms for obtaining non-professional opinions, they pose risks in communicating unreliable and insufficient information in terms of quality and quantity. Existing methods in extracting user-reported adverse drug reactions (ADRs) in online health forums are not only insufficiently accurate as they disregard user credibility and drug experience, but are also expensive as they rely on supervised ground truth annotation of individual statement. We propose a NEural ArchiTecture for Drug side effect prediction (NEAT), which is optimized on the task of drug side effect discovery based on a complete discussion while being attentive to user credibility and experience, thus, addressing the mentioned shortcomings. We train our neural model in a self-supervised fashion using ground truth drug side effects from mayoclinic.org. NEAT learns to assign each user a score that is descriptive of their credibility and highlights the critical textual segments of their post.

RESULTS

Experiments show that NEAT improves drug side effect discovery from online health discussion by 3.04% from user-credibility agnostic baselines, and by 9.94% from non-neural baselines in term of F. Additionally, the latent credibility scores learned by the model correlate well with trustworthiness signals, such as the number of "thanks" received by other forum members, and improve credibility heuristics such as number of posts by 0.113 in term of Spearman's rank correlation coefficient. Experience-based self-supervised attention highlights critical phrases such as mentioned side effects, and enhances fully supervised ADR extraction models based on sequence labelling by 5.502% in terms of precision.

CONCLUSIONS

NEAT considers both user credibility and experience in online health forums, making feasible a self-supervised approach to side effect prediction for mentioned drugs. The derived user credibility and attention mechanism are transferable and improve downstream ADR extraction models. Our approach enhances automatic drug side effect discovery and fosters research in several domains including pharmacovigilance and clinical studies.

摘要

背景

健康 2.0 允许患者和护理人员通过电子门户和在线讨论论坛方便地获取医学信息和建议,特别是关于潜在药物副作用的信息。虽然在线健康社区是获取非专业意见的有用平台,但它们在信息的质量和数量方面存在传播不可靠和不足信息的风险。现有的从在线健康论坛中提取用户报告的药物不良反应(ADR)的方法不仅不够准确,因为它们忽略了用户的可信度和药物使用经验,而且由于依赖于对单个陈述的监督真实注释,因此成本高昂。我们提出了一种用于药物副作用预测的神经架构(NEAT),该架构基于完整的讨论进行了优化,同时关注用户的可信度和经验,从而解决了上述缺点。我们使用 mayoclinic.org 中的真实药物副作用在自监督的方式下训练我们的神经模型。NEAT 学会为每个用户分配一个描述其可信度的分数,并突出他们帖子的关键文本段。

结果

实验表明,与不考虑用户可信度的基准相比,NEAT 提高了在线健康讨论中药物副作用发现的准确率提高了 3.04%,与非神经基准相比提高了 9.94%。此外,模型学习到的潜在可信度分数与可信度信号(如其他论坛成员收到的“谢谢”的数量)高度相关,并提高了可信度启发式方法(如帖子数量),在 Spearman 等级相关系数方面提高了 0.113。基于经验的自监督注意力突出了关键短语,如提到的副作用,并通过序列标记提高了基于完全监督的 ADR 提取模型的准确率提高了 5.502%。

结论

NEAT 在在线健康论坛中同时考虑了用户的可信度和经验,为提到的药物的副作用预测提供了一种可行的自监督方法。所得到的用户可信度和注意力机制是可转移的,并可以提高下游的 ADR 提取模型。我们的方法增强了自动药物副作用发现,并促进了包括药物警戒和临床研究在内的多个领域的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85b6/7341623/4ae901471fce/13326_2020_221_Fig1_HTML.jpg

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