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High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries.高通量 ANI 分析 9 万余组原核基因组揭示了清晰的物种界限。
Nat Commun. 2018 Nov 30;9(1):5114. doi: 10.1038/s41467-018-07641-9.
3
Control of biofouling by xanthine oxidase on seawater reverse osmosis membranes from a desalination plant: enzyme production and screening of bacterial isolates from the full-scale plant.黄嘌呤氧化酶对海水淡化厂反渗透膜生物污垢的控制：酶的生产及对该大型工厂细菌分离株的筛选
Lett Appl Microbiol. 2017 Jul;65(1):73-81. doi: 10.1111/lam.12747. Epub 2017 May 30.
4
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
5
MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices.MEGAHIT v1.0：一种由先进方法和社区实践驱动的快速且可扩展的宏基因组组装工具。
Methods. 2016 Jun 1;102:3-11. doi: 10.1016/j.ymeth.2016.02.020. Epub 2016 Mar 21.
6
The Prevalence and Control of Bacillus and Related Spore-Forming Bacteria in the Dairy Industry.乳制品行业中芽孢杆菌及相关产芽孢细菌的流行情况与控制
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Average nucleotide identity of genome sequences supports the description of Rhizobium lentis sp. nov., Rhizobium bangladeshense sp. nov. and Rhizobium binae sp. nov. from lentil (Lens culinaris) nodules.基因组序列的平均核苷酸同一性支持了从兵豆（小扁豆）根瘤中鉴定出慢生根瘤菌新种、孟加拉根瘤菌新种和双根瘤菌新种。
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Prokka: rapid prokaryotic genome annotation.Prokka：快速的原核生物基因组注释。
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.

从生物污染的反渗透膜中分离出的三种物种的基因组序列草图

Draft Genome Sequences of Three Species Isolated from Biofouled Reverse-Osmosis Membranes.

作者信息

Rehman Zahid Ur, Iftikhar Muhammad Ali, Leiknes TorOve

机构信息

Water Desalination and Reuse Center, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia

Department of Ophthalmology, Luton and Dunstable University Hospital NHS Foundation Trust, Luton, United Kingdom.

出版信息

Microbiol Resour Announc. 2020 Jul 9;9(28):e00413-20. doi: 10.1128/MRA.00413-20.

DOI:10.1128/MRA.00413-20
PMID:32646899
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7348017/
Abstract

Here, we present the draft genome sequences of three bacteria belonging to the genus which were isolated from biofouled reverse-osmosis (RO) membranes harvested from a full-scale desalination plant. The sizes of the assembled genomes for RO1, RO2, and RO3 were 4.22 Mb, 4.15 Mb, and 4.23 Mb, respectively.

摘要

在此，我们展示了从一家大型海水淡化厂采集的生物污染反渗透（RO）膜中分离出的三种属于该属的细菌的基因组序列草图。RO1、RO2和RO3的组装基因组大小分别为4.22 Mb、4.15 Mb和4.23 Mb。