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天然和合成最小系统中的DNA分离

DNA Segregation in Natural and Synthetic Minimal Systems.

作者信息

Hürtgen Daniel, Murray Seán M, Mascarenhas Judita, Sourjik Victor

机构信息

MPI for Terrestrial Microbiology and LOEWE Center for Synthetic Microbiology (Synmikro), Marburg, 35043, Germany.

出版信息

Adv Biosyst. 2019 Jun;3(6):e1800316. doi: 10.1002/adbi.201800316. Epub 2019 Feb 25.

DOI:10.1002/adbi.201800316
PMID:32648710
Abstract

Faithful segregation of replicated genomes to dividing daughter cells is a major hallmark of cellular life and needs to be part of the future design of the robustly proliferating minimal cell. So far, the complexity of eukaryotic chromosome segregation machineries has limited their applicability to synthetic systems. Prokaryotic plasmid segregation machineries offer promising alternative tools for bottom-up synthetic biology, with the first three-component DNA segregation system being reconstituted a decade ago. In this review, the mechanisms underlying DNA segregation in prokaryotes, with a particular focus on segregation of plasmids and chromosomal replication origins are reviewed, along with a brief discussion of archaeal and eukaryotic systems. In addition, this review shows how in vitro reconstitution has allowed deeper insights into these processes and discusses possible applications of these machineries for a minimal synthetic segrosome as well as the challenge of its coupling to a minimal replisome.

摘要

将复制后的基因组准确分离到分裂的子细胞中是细胞生命的一个主要标志,并且需要成为未来强健增殖的最小细胞设计的一部分。到目前为止,真核染色体分离机制的复杂性限制了它们在合成系统中的应用。原核生物的质粒分离机制为自下而上的合成生物学提供了有前景的替代工具,第一个三组分DNA分离系统在十年前就已被重建。在这篇综述中,我们回顾了原核生物中DNA分离的潜在机制,特别关注质粒和染色体复制起点的分离,同时简要讨论了古细菌和真核生物系统。此外,这篇综述展示了体外重建如何使我们对这些过程有更深入的了解,并讨论了这些机制在最小合成分离体中的可能应用以及将其与最小复制体偶联所面临的挑战。

相似文献

1
DNA Segregation in Natural and Synthetic Minimal Systems.天然和合成最小系统中的DNA分离
Adv Biosyst. 2019 Jun;3(6):e1800316. doi: 10.1002/adbi.201800316. Epub 2019 Feb 25.
2
Reconstitution and Coupling of DNA Replication and Segregation in a Biomimetic System.在仿生系统中重建和偶联 DNA 复制和分离。
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3
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Functional Modules of Minimal Cell Division for Synthetic Biology.合成生物学中最小细胞分裂的功能模块
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Hitchhiking on chromosomes: A persistence strategy shared by diverse selfish DNA elements.染色体上的搭便车:多种自私 DNA 元件共有的一种持久性策略。
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Mechanisms for chromosome and plasmid segregation.染色体和质粒分离的机制。
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Reconstitutions of plasmid partition systems and their mechanisms.质粒分配系统的重组及其机制。
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DoriC 10.0: an updated database of replication origins in prokaryotic genomes including chromosomes and plasmids.DoriC 10.0:一个更新的原核生物基因组复制原点数据库,包括染色体和质粒。
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Orderly Replication and Segregation of the Four Replicons of Burkholderia cenocepacia J2315.洋葱伯克霍尔德菌J2315四个复制子的有序复制与分离
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引用本文的文献

1
Unraveling the structure and function of a novel SegC protein interacting with the SegAB chromosome segregation complex in Archaea.揭示新型 SegC 蛋白与古菌 SegAB 染色体分离复合物相互作用的结构和功能。
Nucleic Acids Res. 2024 Sep 9;52(16):9966-9977. doi: 10.1093/nar/gkae660.
2
Investigation of artificial cells containing the Par system for bacterial plasmid segregation and inheritance mimicry.研究含有 Par 系统的人工细胞,以模拟细菌质粒的分离和遗传。
Nat Commun. 2024 Jun 10;15(1):4956. doi: 10.1038/s41467-024-49412-9.
3
Chromosome segregation in Archaea: SegA- and SegB-DNA complex structures provide insights into segrosome assembly.
古菌中的染色体分离:SegA-和 SegB-DNA 复合物结构为 segrosome 组装提供了线索。
Nucleic Acids Res. 2021 Dec 16;49(22):13150-13164. doi: 10.1093/nar/gkab1155.
4
Reconstitution and Coupling of DNA Replication and Segregation in a Biomimetic System.在仿生系统中重建和偶联 DNA 复制和分离。
Chembiochem. 2019 Oct 15;20(20):2633-2642. doi: 10.1002/cbic.201900299. Epub 2019 Aug 28.