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使用 LMNG 隐形载体的小角散射(SANS)表明 NADPH 氧化酶的域间灵活性。

Interdomain Flexibility within NADPH Oxidase Suggested by SANS Using LMNG Stealth Carrier.

机构信息

University Grenoble Alpes, CNRS, CEA, Institut de Biologie Structurale, Grenoble, France.

Institut Laue-Langevin, Grenoble, France.

出版信息

Biophys J. 2020 Aug 4;119(3):605-618. doi: 10.1016/j.bpj.2020.06.025. Epub 2020 Jul 3.

Abstract

Small angle neutron scattering (SANS) provides a method to obtain important low-resolution information for integral membrane proteins (IMPs), challenging targets for structural determination. Specific deuteration furnishes a "stealth" carrier for the solubilized IMP. We used SANS to determine a structural envelope of SpNOX, the Streptococcus pneumoniae NADPH oxidase (NOX), a prokaryotic model system for exploring structure and function of eukaryotic NOXes. SpNOX was solubilized in the detergent lauryl maltose neopentyl glycol, which provides optimal SpNOX stability and activity. Using deuterated solvent and protein, the lauryl maltose neopentyl glycol was experimentally undetected in SANS. This affords a cost-effective SANS approach for obtaining novel structural information on IMPs. Combining SANS data with molecular modeling provided a first, to our knowledge, structural characterization of an entire NOX enzyme. It revealed a distinctly less compact structure than that predicted from the docking of homologous crystal structures of the separate transmembrane and dehydrogenase domains, consistent with a flexible linker connecting the two domains.

摘要

小角中子散射(SANS)为完整膜蛋白(IMP)的整体结构提供了一种获取重要低分辨率信息的方法,这对于结构测定来说是一个极具挑战性的目标。特异性氘代提供了溶解的 IMP 的“隐形”载体。我们使用 SANS 来确定肺炎链球菌 NADPH 氧化酶(NOX)的结构包络,该酶是探索真核 NOX 结构和功能的原核模型系统。SpNOX 溶解在去污剂麦芽糖新戊二醇月桂基醚中,该去污剂可提供最佳的 SpNOX 稳定性和活性。使用氘代溶剂和蛋白质,在 SANS 中无法检测到麦芽糖新戊二醇月桂基醚。这为获得 IMP 的新型结构信息提供了一种具有成本效益的 SANS 方法。将 SANS 数据与分子建模相结合,首次对整个 NOX 酶进行了结构表征。它揭示了一种明显不如从单独的跨膜和脱氢结构域的同源晶体结构对接预测的更紧凑的结构,这与连接两个结构域的柔性接头一致。

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