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单分子定位显微镜研究丝状真菌中的蛋白质组织。

Single-Molecule Localization Microscopy to Study Protein Organization in the Filamentous Fungus .

机构信息

Institute of Applied Physics, TU Wien, Getreidemarkt 9, A-1060 Vienna, Austria.

Department of Microbiology, University of Innsbruck, Technikerstraße 25, A-6020 Innsbruck, Austria.

出版信息

Molecules. 2020 Jul 13;25(14):3199. doi: 10.3390/molecules25143199.

DOI:10.3390/molecules25143199
PMID:32668792
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7396978/
Abstract

Single-molecule localization microscopy has boosted our understanding of biological samples by offering access to subdiffraction resolution using fluorescence microscopy methods. While in standard mammalian cells this approach has found wide-spread use, its application to filamentous fungi has been scarce. This is mainly due to experimental challenges that lead to high amounts of background signal because of ample autofluorescence. Here, we report the optimization of labeling, imaging and data analysis protocols to yield the first single-molecule localization microscopy images of the filamentous fungus . As an example, we show the spatial distribution of the Sur7 tetraspanin-family protein Sfp2 required for hyphal growth and cell wall stability in this mycoparasitic fungus.

摘要

单分子定位显微镜通过荧光显微镜方法提供了亚衍射分辨率的方法,从而提高了我们对生物样本的理解。虽然这种方法在标准哺乳动物细胞中得到了广泛应用,但在丝状真菌中的应用却很少。这主要是由于实验挑战导致大量背景信号,因为丝状真菌有丰富的自发荧光。在这里,我们报告了标记、成像和数据分析方案的优化,以获得丝状真菌的第一个单分子定位显微镜图像。例如,我们展示了丝状真菌中菌丝生长和细胞壁稳定性所必需的 Sur7 四跨膜蛋白家族蛋白 Sfp2 的空间分布。

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2
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本文引用的文献

1
Application of Membrane and Cell Wall Selective Fluorescent Dyes for Live-Cell Imaging of Filamentous Fungi.膜和细胞壁选择性荧光染料在丝状真菌活细胞成像中的应用
J Vis Exp. 2019 Nov 28(153). doi: 10.3791/60613.
2
Super-resolution microscopy demystified.超分辨率显微镜解析。
Nat Cell Biol. 2019 Jan;21(1):72-84. doi: 10.1038/s41556-018-0251-8. Epub 2019 Jan 2.
3
Temporal Filtering to Improve Single Molecule Identification in High Background Samples.时间滤波提高高背景样品中单分子的识别。
Molecules. 2018 Dec 17;23(12):3338. doi: 10.3390/molecules23123338.
4
Visualizing and discovering cellular structures with super-resolution microscopy.用超分辨率显微镜可视化和发现细胞结构。
Science. 2018 Aug 31;361(6405):880-887. doi: 10.1126/science.aau1044. Epub 2018 Aug 30.
5
The Gpr1-regulated Sur7 family protein Sfp2 is required for hyphal growth and cell wall stability in the mycoparasite Trichoderma atroviride.Gpr1 调控的 Sur7 家族蛋白 Sfp2 是真菌捕食性真菌拟青霉丝状生长和细胞壁稳定性所必需的。
Sci Rep. 2018 Aug 13;8(1):12064. doi: 10.1038/s41598-018-30500-y.
6
LITE microscopy: Tilted light-sheet excitation of model organisms offers high resolution and low photobleaching.LITE 显微镜:倾斜光片激发模式生物可提供高分辨率和低光漂白。
J Cell Biol. 2018 May 7;217(5):1869-1882. doi: 10.1083/jcb.201710087. Epub 2018 Feb 28.
7
3D single-molecule super-resolution microscopy with a tilted light sheet.倾斜光片的 3D 单分子超分辨率显微镜。
Nat Commun. 2018 Jan 9;9(1):123. doi: 10.1038/s41467-017-02563-4.
8
Coordinated process of polarized growth in filamentous fungi.丝状真菌中极性生长的协调过程。
Biosci Biotechnol Biochem. 2016 Sep;80(9):1693-9. doi: 10.1080/09168451.2016.1179092. Epub 2016 Apr 28.
9
Superresolution microscopy reveals a dynamic picture of cell polarity maintenance during directional growth.超分辨率显微镜揭示了定向生长过程中细胞极性维持的动态图景。
Sci Adv. 2015 Nov 13;1(10):e1500947. doi: 10.1126/sciadv.1500947. eCollection 2015 Nov.
10
Optimized sample preparation for single-molecule localization-based superresolution microscopy in yeast.优化基于单分子定位的超高分辨率显微镜的酵母样品制备。
Nat Protoc. 2015 Jul;10(7):1007-21. doi: 10.1038/nprot.2015.060. Epub 2015 Jun 11.