• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于X射线衍射动力学理论的薄蛋白质晶体晶体质量评估。

Evaluation of crystal quality of thin protein crystals based on the dynamical theory of X-ray diffraction.

作者信息

Abe Marina, Suzuki Ryo, Kojima Kenichi, Tachibana Masaru

机构信息

Graduate School of Nanobioscience, Yokohama City University, 22-2 Seto, Kanazawa-ku, Yokohama 236-0027, Japan.

Precursory Research for Embryonic Science and Technology (PRESTO), Japan Science and Technology Agency (JST), 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan.

出版信息

IUCrJ. 2020 Jun 26;7(Pt 4):761-766. doi: 10.1107/S2052252520007393. eCollection 2020 Jul 1.

DOI:10.1107/S2052252520007393
PMID:32695422
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7340263/
Abstract

Knowledge of X-ray diffraction in macromolecular crystals is important for not only structural analysis of proteins but also diffraction physics. Dynamical diffraction provides evidence of perfect crystals. Until now, clear dynamical diffraction in protein crystals has only been observed in glucose isomerase crystals. We wondered whether there were other protein crystals with high quality that exhibit dynamical diffraction. Here we report the observation of dynamical diffraction in thin ferritin crystals by rocking-curve measurement and imaging techniques such as X-ray topography. It is generally known that in the case of thin crystals it is difficult to distinguish whether dynamical diffraction occurs from only rocking-curve profiles. Therefore, our results clarified that dynamical diffraction occurs in thin protein crystals because fringe contrasts similar to fringes were clearly observed in the X-ray topographic images. For macromolecular crystallography, it is hard to obtain large crystals because they are difficult to crystallize. For thin crystals, dynamical diffraction can be demonstrated by analysis of the equal-thickness fringes observed by X-ray topography.

摘要

了解大分子晶体中的X射线衍射不仅对蛋白质的结构分析很重要,对衍射物理学也很重要。动态衍射为完美晶体提供了证据。到目前为止,仅在葡萄糖异构酶晶体中观察到了蛋白质晶体中清晰的动态衍射。我们想知道是否还有其他高质量的蛋白质晶体表现出动态衍射。在此,我们报告通过摇摆曲线测量和诸如X射线形貌术等成像技术在薄铁蛋白晶体中观察到动态衍射。众所周知,对于薄晶体,仅从摇摆曲线轮廓很难区分是否发生了动态衍射。因此,我们的结果表明薄蛋白质晶体中发生了动态衍射,因为在X射线形貌图像中清楚地观察到了与条纹相似的条纹对比度。对于大分子晶体学而言,很难获得大晶体,因为它们难以结晶。对于薄晶体,可以通过分析X射线形貌术观察到的等厚条纹来证明动态衍射。

相似文献

1
Evaluation of crystal quality of thin protein crystals based on the dynamical theory of X-ray diffraction.基于X射线衍射动力学理论的薄蛋白质晶体晶体质量评估。
IUCrJ. 2020 Jun 26;7(Pt 4):761-766. doi: 10.1107/S2052252520007393. eCollection 2020 Jul 1.
2
Analysis of oscillatory rocking curve by dynamical diffraction in protein crystals.蛋白质晶体中动力学衍射的摇摆曲线分析。
Proc Natl Acad Sci U S A. 2018 Apr 3;115(14):3634-3639. doi: 10.1073/pnas.1720098115. Epub 2018 Mar 21.
3
Non-projectiveness of X-ray Pendellösung-fringed diffraction images.X射线彭德尔松条纹衍射图像的非投影性
J Synchrotron Radiat. 2000 Nov 1;7(Pt 6):374-81. doi: 10.1107/S0909049500010979.
4
Effects of surface undulations on asymmetric X-ray diffraction: a rocking-curve topography study.表面起伏对非对称X射线衍射的影响:摇摆曲线形貌研究
J Appl Crystallogr. 2020 May 27;53(Pt 3):789-792. doi: 10.1107/S1600576720005166. eCollection 2020 Jun 1.
5
Control of strain in subgrains of protein crystals by the introduction of grown-in dislocations.通过引入生长位错控制蛋白质晶体亚晶粒中的应变。
Acta Crystallogr D Struct Biol. 2021 May 1;77(Pt 5):599-605. doi: 10.1107/S2059798321001820. Epub 2021 Apr 14.
6
X-ray Laue diffraction by sectioned multilayers. I. Pendellösung effect and rocking curves.分段多层膜的X射线劳厄衍射。I. 彭德尔松效应与摇摆曲线。
J Synchrotron Radiat. 2021 Sep 1;28(Pt 5):1466-1475. doi: 10.1107/S1600577521006408. Epub 2021 Aug 9.
7
Laboratory multiple-crystal X-ray topography and reciprocal-space mapping of protein crystals: influence of impurities on crystal perfection.蛋白质晶体的实验室多晶X射线形貌术和倒易空间映射:杂质对晶体完整性的影响。
Acta Crystallogr D Biol Crystallogr. 2001 Jun;57(Pt 6):840-6. doi: 10.1107/s0907444901005832. Epub 2001 May 25.
8
Dynamical theory of X-ray diffraction by crystals with different surface relief profiles.晶体不同表面形貌的 X 射线衍射动力学理论。
Acta Crystallogr A Found Adv. 2023 Mar 1;79(Pt 2):171-179. doi: 10.1107/S2053273322012062. Epub 2023 Jan 23.
9
Origin of irregular X-ray mirage fringes from a bent, thin crystal.来自弯曲薄晶体的不规则X射线幻影条纹的起源。
Acta Crystallogr A Found Adv. 2022 Sep 1;78(Pt 5):422-429. doi: 10.1107/S2053273322006143. Epub 2022 Jul 28.
10
Double-slit X-ray dynamical diffraction in curved crystals.弯曲晶体中的双狭缝 X 射线动力学衍射。
Acta Crystallogr A Found Adv. 2023 Jul 1;79(Pt 4):353-359. doi: 10.1107/S2053273323004345. Epub 2023 Jun 20.

引用本文的文献

1
Anisotropy-Driven Crystallization of Dimensionally Resolved Quasi-1D Van der Waals Nanostructures.各向异性驱动的尺寸分辨准一维范德华纳米结构的结晶
J Am Chem Soc. 2023 Oct 18;145(41):22413-22424. doi: 10.1021/jacs.3c05887. Epub 2023 Sep 15.
2
Existence of twisting in dislocation-free protein single crystals.无位错蛋白单晶体中的扭曲存在。
Proc Natl Acad Sci U S A. 2022 May 24;119(21):e2120846119. doi: 10.1073/pnas.2120846119. Epub 2022 May 16.

本文引用的文献

1
Analysis of oscillatory rocking curve by dynamical diffraction in protein crystals.蛋白质晶体中动力学衍射的摇摆曲线分析。
Proc Natl Acad Sci U S A. 2018 Apr 3;115(14):3634-3639. doi: 10.1073/pnas.1720098115. Epub 2018 Mar 21.
2
Salt effects on the picosecond dynamics of lysozyme hydration water investigated by terahertz time-domain spectroscopy and an insight into the Hofmeister series for protein stability and solubility.太赫兹时域光谱法研究盐对溶菌酶结合水皮秒动力学的影响及对蛋白质稳定性和溶解性的霍夫迈斯特序列的深入洞察。
Phys Chem Chem Phys. 2016 Jun 1;18(22):15060-9. doi: 10.1039/c5cp06324h.
3
A unitary anesthetic binding site at high resolution.
高分辨率下的单一麻醉剂结合位点。
J Biol Chem. 2009 Sep 4;284(36):24176-84. doi: 10.1074/jbc.M109.017814. Epub 2009 Jul 15.
4
Improvements in lysozyme protein crystal perfection through microgravity growth.通过微重力生长提高溶菌酶蛋白晶体的完美度。
Acta Crystallogr D Biol Crystallogr. 1995 Nov 1;51(Pt 6):1099-102. doi: 10.1107/S0907444995012170.
5
Accurate rocking-curve measurements on protein crystals grown in a homogeneous magnetic field of 2.4 T.在2.4T均匀磁场中生长的蛋白质晶体上进行精确的摇摆曲线测量。
Acta Crystallogr D Biol Crystallogr. 2004 Jun;60(Pt 6):987-98. doi: 10.1107/S0907444904005268. Epub 2004 May 21.
6
Triple-axis X-ray diffraction analyses of lysozyme crystals.溶菌酶晶体的三轴X射线衍射分析。
Acta Crystallogr D Biol Crystallogr. 2000 Jul;56(Pt 7):881-9. doi: 10.1107/s090744490000593x.
7
Synchrotron X-ray reciprocal-space mapping, topography and diffraction resolution studies of macromolecular crystal quality.大分子晶体质量的同步加速器X射线倒易空间映射、形貌和衍射分辨率研究。
Acta Crystallogr D Biol Crystallogr. 2000 Jul;56(Pt 7):868-80. doi: 10.1107/s0907444900005837.
8
Real-space refinement of the structure of hen egg-white lysozyme.鸡蛋清溶菌酶结构的实空间精修
J Mol Biol. 1974 Jan 25;82(3):371-91. doi: 10.1016/0022-2836(74)90598-1.