Hite Jessica L, Pfenning-Butterworth Alaina C, Vetter Rachel E, Cressler Clayton E
School of Biological Sciences University of Nebraska Lincoln Nebraska USA.
Ecol Evol. 2020 Jun 16;10(13):6239-6245. doi: 10.1002/ece3.6352. eCollection 2020 Jul.
Food ingestion is one of the most basic features of all organisms. However, obtaining precise-and high-throughput-estimates of feeding rates remains challenging, particularly for small, aquatic herbivores such as zooplankton, snails, and tadpoles. These animals typically consume low volumes of food that are time-consuming to accurately measure.We extend a standard high-throughput fluorometry technique, which uses a microplate reader and 96-well plates, as a practical tool for studies in ecology, evolution, and disease biology. We outline technical and methodological details to optimize quantification of individual feeding rates, improve accuracy, and minimize sampling error.This high-throughput assay offers several advantages over previous methods, including i) substantially reduced time allotments per sample to facilitate larger, more efficient experiments; ii) technical replicates; and iii) conversion of in vivo measurements to units (mL hr ind) which enables broad-scale comparisons across an array of taxa and studies.To evaluate the accuracy and feasibility of our approach, we use the zooplankton, as a case study. Our results indicate that this procedure accurately quantifies feeding rates and highlights differences among seven genotypes.The method detailed here has broad applicability to a diverse array of aquatic taxa, their resources, environmental contaminants (e.g., plastics), and infectious agents. We discuss simple extensions to quantify epidemiologically relevant traits, such as pathogen exposure and transmission rates, for infectious agents with oral or trophic transmission.
摄食是所有生物最基本的特征之一。然而,获得精确且高通量的摄食率估计值仍然具有挑战性,尤其是对于小型水生食草动物,如浮游动物、蜗牛和蝌蚪。这些动物通常消耗的食物量很少,准确测量很耗时。我们扩展了一种标准的高通量荧光测定技术,该技术使用微孔板读数器和96孔板,作为生态学、进化生物学和疾病生物学研究的实用工具。我们概述了技术和方法细节,以优化个体摄食率的量化、提高准确性并将采样误差降至最低。这种高通量测定法相对于以前的方法具有几个优点,包括:i)每个样本的时间分配大幅减少,便于进行更大规模、更高效的实验;ii)技术重复;iii)将体内测量值转换为单位(mL·hr·ind),这使得能够在一系列分类群和研究中进行广泛比较。为了评估我们方法的准确性和可行性,我们以浮游动物为例进行研究。我们的结果表明,该程序能够准确量化摄食率,并突出了七种基因型之间的差异。这里详细介绍的方法广泛适用于各种水生分类群、它们的资源、环境污染物(如塑料)和传染因子。我们讨论了一些简单的扩展方法,用于量化与流行病学相关的特征,如经口或营养传播的传染因子的病原体暴露和传播率。