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拟南芥 KS 型脱水素的防冻活性依赖于两个活性片段的疏水性氨基酸。

Cryoprotective activity of Arabidopsis KS-type dehydrin depends on the hydrophobic amino acids of two active segments.

机构信息

Research Institute of Green Science and Technology, Shizuoka University, 836 Ohya, Shizuoka, 422-8529, Japan.

Research Institute of Green Science and Technology, Shizuoka University, 836 Ohya, Shizuoka, 422-8529, Japan.

出版信息

Arch Biochem Biophys. 2020 Sep 30;691:108510. doi: 10.1016/j.abb.2020.108510. Epub 2020 Jul 28.

Abstract

Dehydrins are intrinsically disordered proteins which are related to cold tolerance in plants. Dehydrins show potent cryoprotective activities for freeze-sensitive enzymes such as lactate dehydrogenase (LDH). Previous studies demonstrated that K-segments conserved in dehydrins had cryoprotective activities and that K-segment activities depended on the hydrophobic amino acids in the segment. However, the cryoprotective roles of hydrophobic amino acids in dehydrin itself have not been reported. Here, we demonstrated that hydrophobic amino acids were required for the cryoprotective activity of Arabidopsis dehydrin AtHIRD11. Cryoprotective activities were compared between AtHIRD11 and the corresponding mutant in which all hydrophobic residues were changed to T (AtHIRD11Φ/T) by using LDH. The change strikingly reduced AtHIRD11 activity. A segmentation analysis indicated that the conserved K-segment (Kseg) and a previously unidentified segment (non-K-segment 1, NK1) showed cryoprotective activities. Circular dichroism indicated that the secondary structures of all peptides showed disorder, but only cryoprotective peptides changed to the ordered forms by sodium dodecyl sulfate. Ultracentrifuge analysis indicated that AtHIRD11 and AtHIRD11Φ/T had similar molecular sizes in solution. These results suggest that not only structural disorder but also hydrophobic amino acids contributed to the cryoprotective activity of AtHIRD11. A possible mechanism based on an extended molecular shield model is proposed.

摘要

脱水蛋白是与植物耐冷性相关的无规则卷曲蛋白。脱水蛋白对乳酸脱氢酶(LDH)等对冷冻敏感的酶具有很强的抗冷冻保护活性。先前的研究表明,脱水蛋白中保守的 K 片段具有抗冷冻保护活性,并且 K 片段的活性取决于该片段中的疏水性氨基酸。然而,脱水蛋白本身中的疏水性氨基酸的抗冷冻保护作用尚未报道。在这里,我们证明了拟南芥脱水蛋白 AtHIRD11 中的疏水性氨基酸是其抗冷冻保护活性所必需的。通过使用 LDH 比较了 AtHIRD11 及其相应的突变体(所有疏水性残基均突变为 T 的 AtHIRD11Φ/T)的抗冷冻保护活性。这种变化显著降低了 AtHIRD11 的活性。分段分析表明,保守的 K 片段(Kseg)和以前未识别的片段(非 K 片段 1,NK1)具有抗冷冻保护活性。圆二色性表明所有肽的二级结构均呈无规则卷曲,但只有抗冷冻保护肽在十二烷基硫酸钠的作用下转变为有序形式。超速离心分析表明,AtHIRD11 和 AtHIRD11Φ/T 在溶液中的分子大小相似。这些结果表明,不仅结构无序,而且疏水性氨基酸也有助于 AtHIRD11 的抗冷冻保护活性。提出了一种基于扩展分子屏蔽模型的可能机制。

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