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本文引用的文献

1
Polygenic adaptation after a sudden change in environment.环境骤变后的多基因适应。
Elife. 2022 Sep 26;11:e66697. doi: 10.7554/eLife.66697.
2
A community-maintained standard library of population genetic models.一个社区维护的种群遗传模型标准库。
Elife. 2020 Jun 23;9:e54967. doi: 10.7554/eLife.54967.
3
Limited Evidence for Selection at the FADS Locus in Native American Populations.有限的证据表明 FADS 基因座在美洲原住民群体中受到选择。
Mol Biol Evol. 2020 Jul 1;37(7):2029-2033. doi: 10.1093/molbev/msaa064.
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Genome-Wide Natural Selection Signatures Are Linked to Genetic Risk of Modern Phenotypes in the Japanese Population.全基因组自然选择信号与日本人群现代表型的遗传风险相关。
Mol Biol Evol. 2020 May 1;37(5):1306-1316. doi: 10.1093/molbev/msaa005.
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Polygenic Patterns of Adaptive Introgression in Modern Humans Are Mainly Shaped by Response to Pathogens.现代人类适应性基因渗入的多基因模式主要由对病原体的反应塑造。
Mol Biol Evol. 2020 May 1;37(5):1420-1433. doi: 10.1093/molbev/msz306.
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Polygenic Adaptation to an Environmental Shift: Temporal Dynamics of Variation Under Gaussian Stabilizing Selection and Additive Effects on a Single Trait.多基因适应环境变化:在高斯稳定选择和单一性状加性效应下的变异时间动态。
Genetics. 2019 Dec;213(4):1513-1530. doi: 10.1534/genetics.119.302662. Epub 2019 Oct 25.
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Genetic contributions to variation in human stature in prehistoric Europe.遗传因素对史前欧洲人类身高变化的贡献。
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Genomic Evidence for Local Adaptation of Hunter-Gatherers to the African Rainforest.基因组证据表明,狩猎采集者适应了非洲雨林的环境。
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Impact and Evolutionary Determinants of Neanderthal Introgression on Transcriptional and Post-Transcriptional Regulation.尼安德特人基因渗入对转录和转录后调控的影响及进化决定因素。
Am J Hum Genet. 2019 Jun 6;104(6):1241-1250. doi: 10.1016/j.ajhg.2019.04.016. Epub 2019 May 30.
10
How well do we understand the basis of classic selective sweeps in humans?我们对人类经典选择清除的基础了解得如何?
FEBS Lett. 2019 Jul;593(13):1431-1448. doi: 10.1002/1873-3468.13447. Epub 2019 Jun 11.

过去4万年里人类的适应性变化。

Human adaptation over the past 40,000 years.

作者信息

Mathieson Iain

机构信息

Department of Genetics, Perelman School of Medicine, University of Pennsylvania, United States.

出版信息

Curr Opin Genet Dev. 2020 Jun;62:97-104. doi: 10.1016/j.gde.2020.06.003. Epub 2020 Aug 1.

DOI:10.1016/j.gde.2020.06.003
PMID:32745952
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7484260/
Abstract

Over the past few years several methodological and data-driven advances have greatly improved our ability to robustly detect genomic signatures of selection in humans. New methods applied to large samples of present-day genomes provide increased power, while ancient DNA allows precise estimation of timing and tempo. However, despite these advances, we are still limited in our ability to translate these signatures into understanding about which traits were actually under selection, and why. Combining information from different populations and timescales may allow interpretation of selective sweeps. Other modes of selection have proved more difficult to detect. In particular, despite strong evidence of the polygenicity of most human traits, evidence for polygenic selection is weak, and its importance in recent human evolution remains unclear. Balancing selection and archaic introgression seem important for the maintenance of potentially adaptive immune diversity, but perhaps less so for other traits.

摘要

在过去几年中,一些方法学和数据驱动的进展极大地提高了我们在人类中稳健检测选择的基因组特征的能力。应用于当今大量基因组样本的新方法提高了检测能力,而古代DNA则使我们能够精确估计选择发生的时间和速度。然而,尽管有这些进展,我们将这些特征转化为对哪些性状实际上受到选择以及原因的理解的能力仍然有限。整合来自不同人群和时间尺度的信息可能有助于解释选择性清除。其他选择模式则更难检测。特别是,尽管有强有力的证据表明大多数人类性状具有多基因性,但多基因选择的证据却很薄弱,其在近期人类进化中的重要性仍不明确。平衡选择和古老基因渗入似乎对于维持潜在的适应性免疫多样性很重要,但对其他性状而言可能并非如此。