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外显子组测序在产前诊断中的应用:快速范围综述。

Application of exome sequencing for prenatal diagnosis: a rapid scoping review.

机构信息

Children's Hospital of Eastern Ontario Research Institute, Ottawa, ON, Canada.

Knowledge Synthesis Group, Ottawa Hospital Research Institute, Ottawa, ON, Canada.

出版信息

Genet Med. 2020 Dec;22(12):1925-1934. doi: 10.1038/s41436-020-0918-y. Epub 2020 Aug 4.

DOI:10.1038/s41436-020-0918-y
PMID:32747765
Abstract

Genetic diagnosis provides important information for prenatal decision-making and management. Promising results from exome sequencing (ES) for genetic diagnosis in fetuses with structural anomalies are emerging. The objective of this scoping review was to identify what is known about the use of ES for genetic testing in prenatal cases with known or suspected genetic disease. A rapid scoping review was conducted over a six-week timeframe of English-language peer-reviewed studies. Search strategies for major databases (e.g., Medline) and gray literature were developed, and peer reviewed by information specialists. Identified studies were categorized and charted using tables and diagrams. Twenty-four publications were included from seven countries published between 2014 and 2019. Most commonly reported outcomes were diagnostic yields, which varied widely from 5% to 57%, and prenatal phenotype. Few studies reported clinical outcomes related to impact, decision-making, and clinical utility. Qualitative studies (n = 6) provided useful insights into patient and health-care provider experiences with ES. Findings suggest prenatal ES is beneficial, but more research is needed to better understand the clinical utility, circumstances for ideal use, feasibility, and costs of offering rapid ES as a routine option for prenatal genetic testing.

摘要

遗传诊断为产前决策和管理提供了重要信息。针对结构异常胎儿的外显子组测序(ES)在遗传诊断方面取得了有希望的结果。本范围综述的目的是确定在已知或疑似遗传疾病的产前病例中,使用 ES 进行基因检测的情况。在六周的时间内,对英文同行评议研究进行了快速范围综述。制定了针对主要数据库(例如 Medline)和灰色文献的搜索策略,并由信息专家进行了同行评议。使用表格和图表对确定的研究进行了分类和制图。从 2014 年至 2019 年,来自七个国家的 24 篇出版物被纳入研究。报告的最常见结果是诊断率,从 5%到 57%不等,以及产前表型。很少有研究报告与影响、决策和临床实用性相关的临床结果。6 项定性研究(n=6)提供了有关 ES 患者和医疗保健提供者体验的有用见解。研究结果表明,产前 ES 是有益的,但需要进一步研究以更好地了解临床实用性、理想使用情况、可行性以及将快速 ES 作为产前基因检测常规选择的成本。

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本文引用的文献

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From diagnostic yield to clinical impact: a pilot study on the implementation of prenatal exome sequencing in routine care.从诊断产出到临床影响:产前外显子组测序在常规护理中的实施试点研究。
Genet Med. 2019 Oct;21(10):2303-2310. doi: 10.1038/s41436-019-0499-9. Epub 2019 Mar 28.
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Genetics professionals' attitudes toward prenatal exome sequencing.遗传学专业人员对产前外显子组测序的态度。
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Lessons from exome sequencing in prenatally diagnosed heart defects: A basis for prenatal testing.
同时进行拷贝数变异测序(CNV-seq)和全外显子测序(WES):一种用于不明原因胎儿结构异常分子诊断的有效策略。
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Singapore Med J. 2023 Jan;64(1):27-36. doi: 10.4103/singaporemedj.SMJ-2021-433.
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Implementation of Public Funded Genome Sequencing in Evaluation of Fetal Structural Anomalies.公共资助基因组测序在胎儿结构异常评估中的应用。
Genes (Basel). 2022 Nov 10;13(11):2088. doi: 10.3390/genes13112088.
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Lack of consensus among healthcare professionals at a large academic medical center on the use of exome sequencing for prenatal diagnosis.大型学术医疗中心的医疗保健专业人员在使用外显子组测序进行产前诊断的问题上缺乏共识。
J Genet Couns. 2022 Dec;31(6):1330-1340. doi: 10.1002/jgc4.1607. Epub 2022 Jul 7.
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Information is power: The experiences, attitudes and needs of individuals who chose to have prenatal genomic sequencing for fetal anomalies.信息就是力量:选择进行产前基因组测序以检测胎儿异常的个体的经历、态度和需求。
Prenat Diagn. 2022 Jun;42(7):947-954. doi: 10.1002/pd.6153. Epub 2022 May 4.
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Prenat Diagn. 2022 May;42(6):662-685. doi: 10.1002/pd.6115. Epub 2022 May 7.
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Clinical exome sequencing for fetuses with ultrasound abnormalities and a suspected Mendelian disorder.胎儿超声异常且疑为孟德尔遗传病时的临床外显子组测序
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Health professionals' and researchers' perspectives on prenatal whole genome and exome sequencing: 'We can't shut the door now, the genie's out, we need to refine it'.健康专业人员和研究人员对产前全基因组和外显子组测序的看法:“我们现在不能关门,精灵已经出来了,我们需要对其进行改进”。
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