Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing 210046, China.
Biochem J. 2020 Aug 28;477(16):3059-3074. doi: 10.1042/BCJ20200444.
Operons are rare in eukaryotes, where they often allow concerted expression of functionally related genes. While a dicistronic transcription unit encoding two unrelated genes, the suppressor of position-effect variegation su(var)3-9 and the gamma subunit of eukaryotic translation initiation factor 2 (eIF2γ) has been found in insecta, and its significance is not well understood. Here, we analyzed the evolutionary history of this transcription unit in arthropods and its functions by using model Coleoptera insect Tribolium castaneum. In T. castaneum, Tcsu(var)3-9 fused into the 80 N-terminal amino acids of TceIF2γ, the transcription of these two genes are resolved by alternative splicing. Phylogenetic analysis supports the natural gene fusion of su(var)3-9 and eIF2γ occurred in the ancestral line of winged insects and silverfish, but with frequent re-fission during the evolution of insects. Functional analysis by using RNAi for these two genes revealed that gene fusion did not invoke novel functions for the gene products. As a histone methyltransferase, Tcsu(var)3-9 is primarily responsible for H3K9 di-, and tri-methylation and plays important roles in metamorphosis and embryogenesis in T. castaneum. While TceIF2γ plays essential roles in T. castaneum by positively regulating protein translation mediated ecdysteroid biosynthesis. The vulnerability of the gene fusion and totally different role of su(var)3-9 and eIF2γ in T. castaneum confirm this gene fusion is a non-selected, constructive neutral evolution event in insect. Moreover, the positive relationship between protein translation and ecdysteroid biosynthesis gives new insights into correlations between translation regulation and hormonal signaling.
操纵子在真核生物中很少见,它们通常允许功能相关基因的协调表达。虽然已经在昆虫中发现了编码两个不相关基因的双顺反子转录单元,即位置效应变异性抑制子 su(var)3-9 和真核翻译起始因子 2 (eIF2γ)的γ亚基,但它的意义尚不清楚。在这里,我们通过使用模式鞘翅目昆虫赤拟谷盗 Tribolium castaneum 分析了这个转录单元在节肢动物中的进化历史及其功能。在 T. castaneum 中,Tcsu(var)3-9 融合到 TceIF2γ 的 80 个 N 端氨基酸中,这两个基因的转录通过选择性剪接来解决。系统发育分析支持 su(var)3-9 和 eIF2γ 的自然基因融合发生在有翅昆虫和衣鱼的祖先谱系中,但在昆虫的进化过程中频繁地重新分裂。通过 RNAi 对这两个基因进行功能分析表明,基因融合没有赋予基因产物新的功能。作为一种组蛋白甲基转移酶,Tcsu(var)3-9 主要负责 H3K9 二甲基化和三甲基化,在 T. castaneum 的变态和胚胎发生中发挥重要作用。而 TceIF2γ 通过正调控蜕皮激素生物合成介导的蛋白质翻译在 T. castaneum 中发挥重要作用。基因融合的脆弱性和 su(var)3-9 和 eIF2γ 在 T. castaneum 中完全不同的作用证实了这种基因融合是昆虫中非选择性的建设性中性进化事件。此外,蛋白质翻译和蜕皮激素生物合成之间的正相关关系为翻译调控和激素信号之间的相关性提供了新的见解。