从羊驼奶中分离出的唾液乳杆菌TUCO-L2的基因组序列草图
Draft Genome Sequence of Ligilactobacillus salivarius TUCO-L2, Isolated from Lama glama Milk.
作者信息
Albarracin Leonardo, Quilodrán-Vega Sandra, Fukuyama Kohtaro, Tomokiyo Mikado, Islam M Aminul, Arce Lorena, Kitazawa Haruki, Villena Julio
机构信息
Laboratory of Immunobiotechnology, Reference Centre for Lactobacilli (CERELA-CONICET), Tucumán, Argentina.
Laboratory of Food Microbiology, Faculty of Veterinary Sciences, University of Concepción, Chillán, Chile.
出版信息
Microbiol Resour Announc. 2020 Aug 6;9(32):e00784-20. doi: 10.1128/MRA.00784-20.
Abstract
TUCO-L2 was isolated from llama milk in Bio-Bio, Chile, and sequenced with the Illumina MiSeq platform. TUCO-L2 genome sequencing revealed a genome size of 1,600,747 bp with 1,691 protein-coding genes and a GC content of 33%. This draft genome sequence will contribute to a better understanding of the microbiome of llama milk.
摘要
TUCO-L2是从智利比奥比奥的羊驼奶中分离出来的，并使用Illumina MiSeq平台进行测序。TUCO-L2基因组测序显示其基因组大小为1,600,747 bp，有1,691个蛋白质编码基因，GC含量为33%。该基因组草图序列将有助于更好地了解羊驼奶的微生物群落。
相似文献
1
Draft Genome Sequence of Ligilactobacillus salivarius TUCO-L2, Isolated from Lama glama Milk.
Microbiol Resour Announc. 2020 Aug 6;9(32):e00784-20. doi: 10.1128/MRA.00784-20.
2
Functional and Genomic Characterization of TUCO-L2 Isolated From Milk: A Promising Immunobiotic Strain to Combat Infections.
Front Microbiol. 2020 Dec 8;11:608752. doi: 10.3389/fmicb.2020.608752. eCollection 2020.
3
Draft Genome Sequence of Ligilactobacillus salivarius FFIG58, Isolated from the Intestinal Tract of Wakame-Fed Pig.
Microbiol Resour Announc. 2020 Aug 20;9(34):e00839-20. doi: 10.1128/MRA.00839-20.
4
Draft Genome Sequence of Probiotic Lactobacillus brevis TUCO-5E, Isolated from Porcine Milk.
Microbiol Resour Announc. 2018 Nov 15;7(19). doi: 10.1128/MRA.01239-18. eCollection 2018 Nov.
5
Complete genome sequence of bacteriocin-producing B4311 isolated from fecal samples of broiler chicken with anti-listeria activity.
J Anim Sci Technol. 2024 Jan;66(1):232-236. doi: 10.5187/jast.2023.e40. Epub 2024 Jan 31.
6
Draft Genome Sequences of Two Lactobacillus johnsonii and Three Ligilactobacillus salivarius Strains Isolated from Intestinal Microbiomes of Chickens.
Microbiol Resour Announc. 2022 Feb 17;11(2):e0092521. doi: 10.1128/mra.00925-21. Epub 2022 Feb 3.
7
Draft whole-genome sequences of competitive exclusion strains for poultry.
Microbiol Resour Announc. 2023 Oct 19;12(10):e0031623. doi: 10.1128/MRA.00316-23. Epub 2023 Sep 15.
8
2102-15 complete genome sequence data.
Data Brief. 2023 Sep 12;50:109564. doi: 10.1016/j.dib.2023.109564. eCollection 2023 Oct.
9
Combining proteomic tools to characterize the protein fraction of llama (Lama glama) milk.
Electrophoresis. 2014 May;35(10):1406-18. doi: 10.1002/elps.201300383. Epub 2014 Mar 25.
10
Draft Genome Sequences of Lactobacillus salivarius A3iob and Lactobacillus johnsonii CRL1647, Novel Potential Probiotic Strains for Honeybees (Apis mellifera L.).
Microbiol Resour Announc. 2018 Aug 16;7(6). doi: 10.1128/MRA.00975-18. eCollection 2018 Aug.
引用本文的文献
1
Research Development on Anti-Microbial and Antioxidant Properties of Camel Milk and Its Role as an Anti-Cancer and Anti-Hepatitis Agent.
Antioxidants (Basel). 2021 May 17;10(5):788. doi: 10.3390/antiox10050788.
2
Functional and Genomic Characterization of TUCO-L2 Isolated From Milk: A Promising Immunobiotic Strain to Combat Infections.
Front Microbiol. 2020 Dec 8;11:608752. doi: 10.3389/fmicb.2020.608752. eCollection 2020.
本文引用的文献
1
A taxonomic note on the genus : Description of 23 novel genera, emended description of the genus Beijerinck 1901, and union of and .
Int J Syst Evol Microbiol. 2020 Apr;70(4):2782-2858. doi: 10.1099/ijsem.0.004107. Epub 2020 Apr 15.
2
CECT5716 Supplementation in Rats during Pregnancy and Lactation Impacts Maternal and Offspring Lipid Profile, Immune System and Microbiota.
Cells. 2020 Feb 28;9(3):575. doi: 10.3390/cells9030575.
3
Camelids: new players in the international animal production context.
Trop Anim Health Prod. 2020 May;52(3):903-913. doi: 10.1007/s11250-019-02197-2. Epub 2020 Jan 2.
4
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins.
Nucleic Acids Res. 2018 Jul 2;46(W1):W246-W251. doi: 10.1093/nar/gky425.
5
BAGEL4: a user-friendly web server to thoroughly mine RiPPs and bacteriocins.
Nucleic Acids Res. 2018 Jul 2;46(W1):W278-W281. doi: 10.1093/nar/gky383.
6
Comparative genomics of Lactobacillus salivarius strains focusing on their host adaptation.
Microbiol Res. 2017 Dec;205:48-58. doi: 10.1016/j.micres.2017.08.008. Epub 2017 Aug 24.
7
NCBI prokaryotic genome annotation pipeline.
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
8
Isolation of lactic acid bacteria from swine milk and characterization of potential probiotic strains with antagonistic effects against swine-associated gastrointestinal pathogens.
Can J Microbiol. 2016 Jun;62(6):514-24. doi: 10.1139/cjm-2015-0811. Epub 2016 Feb 25.
9
Meat quality attributes of the Longissimus lumborum muscle of the Kh'ara genotype of llama (Lama glama) reared extensively in northern Chile.
Meat Sci. 2013 May;94(1):89-94. doi: 10.1016/j.meatsci.2012.12.013. Epub 2013 Jan 5.
10
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
Zotero 插件