Earlham Institute, Norfolk, UK.
Methods Mol Biol. 2020;2205:179-199. doi: 10.1007/978-1-0716-0908-8_11.
Phytobricks are standardized DNA parts for plants that can be assembled hierarchically into transcriptional units and, subsequently, into multigene constructs. Phytobricks each contain the sequences of one or more functional elements that comprise eukaryotic transcription units, with sequence features that enable them to be used interchangeably in one-step cloning reactions to facilitate combinatorial assembly. The simplicity and efficiency of this one-step reaction has enabled Phytobrick assembly to be miniaturized and automated on liquid handing platforms. In this method, we describe how to design and construct new Phytobricks as well as how to assemble them in both manual and nanoscale automated one-step reactions. Finally, we describe a high-throughput method for sequence verification of assembled plasmids.
植物生物砖是植物标准化的 DNA 片段,可分层组装成转录单元,然后组装成多基因构建体。每个植物生物砖都包含一个或多个组成真核转录单元的功能元件的序列,这些序列特征使它们能够在一步克隆反应中互换使用,从而促进组合组装。这种一步反应的简单性和效率使得植物生物砖的组装可以在液体处理平台上微型化和自动化。在这种方法中,我们描述了如何设计和构建新的植物生物砖,以及如何在手动和纳米级自动化一步反应中组装它们。最后,我们描述了一种用于组装质粒序列验证的高通量方法。