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利用电离辐射研究大肠杆菌染色体中稳定DNA三级结构的相互作用。

Interactions stabilizing DNA tertiary structure in the Escherichia coli chromosome investigated with ionizing radiation.

作者信息

Lydersen B K, Pettijohn D E

出版信息

Chromosoma. 1977 Jul 8;62(3):199-215. doi: 10.1007/BF00286044.

DOI:10.1007/BF00286044
PMID:328241
Abstract

The structure of the bacterial chromosome was investigated after introducing breaks in the DNA with gamma irradiation. It is demonstrated that irradiation of the chromosome in the cell prior to isolation results in partial unfolding of the isolated condensed DNA, while irradiation of the chromosome after it is released from the cell has no demonstrable effect on DNA folding. The results indicate that RNA/DNA interactions which stabilize DNA folds are unstable when breaks are introduced in the DNA prior to isolation of the chromosome. It is suggested that the supercoiled state of the DNA is required for the initial stabilization of some of the critical RNA/DNA interaction in the isolated nucleoid. However, some of these interactions are not affected by irradiation of the cells. Remnant supercoiling in partially relaxed chromosomes containing a limited number of DNA breaks has the same superhelical density as the unirradiated chromosome. This suggests that restraints on rotation of the packaged DNA are formed prior to the physical unwinding which occurs at the sites of the radiation induced DNA breads. - Analysis of the in vitro irradiated chromosomes shows that there are 100 +/- 30 domains of supercoiling per genome equivalent of DNA. The introduction of up to 50 double-strand breaks per nucleoid does not influence rotor speed effects of the sedimentation coefficient of the chromosome.

摘要

在用γ射线照射使DNA产生断裂后,对细菌染色体的结构进行了研究。结果表明,在分离前对细胞内的染色体进行照射会导致分离出的浓缩DNA部分展开,而在染色体从细胞中释放后进行照射对DNA折叠没有明显影响。结果表明,在分离染色体之前DNA产生断裂时,稳定DNA折叠的RNA/DNA相互作用是不稳定的。有人提出,DNA的超螺旋状态是分离的类核中一些关键RNA/DNA相互作用初始稳定所必需的。然而,其中一些相互作用不受细胞照射的影响。含有有限数量DNA断裂的部分松弛染色体中的残余超螺旋与未照射的染色体具有相同的超螺旋密度。这表明,在辐射诱导的DNA断裂位点发生物理解旋之前,就形成了对包装DNA旋转的限制。- 对体外照射的染色体分析表明,每个基因组当量的DNA有100±30个超螺旋结构域。每个类核引入多达50个双链断裂不会影响染色体沉降系数的转子速度效应。

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本文引用的文献

1
SEDIMENTATION STUDIES OF THE SIZE AND SHAPE OF DNA.DNA大小与形状的沉降研究
J Mol Biol. 1965 Feb;11:373-90. doi: 10.1016/s0022-2836(65)80064-x.
2
Sedimentation rate as a measure of molecular weight of DNA.沉降速率作为DNA分子量的一种衡量指标。
Biophys J. 1963 Jul;3(4):309-21. doi: 10.1016/s0006-3495(63)86823-x.
3
Molecular weights of homogeneous coliphage DNA's from density-gradient sedimentation equilibrium.通过密度梯度沉降平衡法测定的同源大肠杆菌噬菌体DNA的分子量
Radiat Environ Biophys. 2003 Oct;42(3):189-92. doi: 10.1007/s00411-003-0205-8. Epub 2003 Sep 11.
4
Topological challenges to DNA replication: conformations at the fork.DNA复制面临的拓扑学挑战:复制叉处的构象
Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8219-26. doi: 10.1073/pnas.111006998.
5
Induced radioresistance: an aspect of induced repair.诱导抗性:诱导修复的一个方面。
Mol Gen Genet. 1981;184(3):421-9. doi: 10.1007/BF00352516.
6
Membrane-DNA attachment sites in Streptococcus faecalis cells grown at different rates.不同生长速率下粪肠球菌细胞中的膜-DNA附着位点。
J Bacteriol. 1982 Oct;152(1):191-200. doi: 10.1128/jb.152.1.191-200.1982.
7
Cellular location of Mu DNA replicas.缪氏DNA复制体的细胞定位
J Virol. 1981 Apr;38(1):249-55. doi: 10.1128/JVI.38.1.249-255.1981.
8
Supercoils in prokaryotic DNA restrained in vivo.原核生物DNA中的超螺旋在体内受到限制。
Proc Natl Acad Sci U S A. 1980 Mar;77(3):1331-5. doi: 10.1073/pnas.77.3.1331.
9
Chromosomes in living Escherichia coli cells are segregated into domains of supercoiling.活的大肠杆菌细胞中的染色体被分隔成超螺旋结构域。
Proc Natl Acad Sci U S A. 1981 Jan;78(1):224-8. doi: 10.1073/pnas.78.1.224.
10
Repair of the Escherichia coli chromosome after in vivo scission by the EcoRI endonuclease.经EcoRI核酸内切酶体内切割后大肠杆菌染色体的修复
Proc Natl Acad Sci U S A. 1989 Apr;86(7):2281-5. doi: 10.1073/pnas.86.7.2281.
J Mol Biol. 1969 Aug 28;44(1):143-60. doi: 10.1016/0022-2836(69)90410-0.
4
Interlocked DNA rings. II. Physicochemical studies.互锁DNA环。II. 物理化学研究。
Biopolymers. 1970;9(4):489-502. doi: 10.1002/bip.1970.360090410.
5
Single-strand breaks in gamma-irradiated phi-X174 DNA induced by exposure to alkali.暴露于碱中γ射线辐照的φ-X174 DNA中的单链断裂。
Int J Radiat Biol Relat Stud Phys Chem Med. 1971;20(5):501-4. doi: 10.1080/09553007114551411.
6
Chromosome replication and the division cycle of Escherichia coli B-r.大肠杆菌B-r的染色体复制与分裂周期
J Bacteriol. 1971 Jul;107(1):95-9. doi: 10.1128/jb.107.1.95-99.1971.
7
Discontinuities in the DNA synthesized in an excision-defective strain of Escherichia coli following ultraviolet irradiation.紫外线照射后,大肠杆菌切除缺陷菌株中合成的DNA的不连续性。
J Mol Biol. 1968 Jan 28;31(2):291-304. doi: 10.1016/0022-2836(68)90445-2.
8
RNA molecules bound to the folded bacterial genome stabilize DNA folds and segregate domains of supercoiling.与折叠的细菌基因组结合的RNA分子可稳定DNA折叠并分离超螺旋结构域。
Cold Spring Harb Symp Quant Biol. 1974;38:31-41. doi: 10.1101/sqb.1974.038.01.006.
9
The rapair of DNA single-strand breaks in E. coli K-12 x-irradiated in the presence or absence of oxygen; the influence of repair on cell survival.
Radiat Res. 1973 Aug;55(2):334-45.
10
On the structure of the folded chromosome of Escherichia coli.关于大肠杆菌折叠染色体的结构
J Mol Biol. 1972 Nov 14;71(2):127-47. doi: 10.1016/0022-2836(72)90342-7.