Ariaeenejad Shohreh, Nooshi-Nedamani Safura, Rahban Mahdie, Kavousi Kaveh, Pirbalooti Atefeh Ghasemi, Mirghaderi SeyedSoheil, Mohammadi Mahsa, Mirzaei Mehdi, Salekdeh Ghasem Hosseini
Department of Systems and Synthetic Biology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREEO), Karaj, Iran.
Laboratory of Complex Biological Systems and Bioinformatics (CBB), Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, Iran.
Front Bioeng Biotechnol. 2020 Jul 30;8:813. doi: 10.3389/fbioe.2020.00813. eCollection 2020.
The rate-limiting component of cellulase for efficient degradation of lignocellulosic biomass through the enzymatic route depends on glucosidase's sensitivity to the end product (glucose). Therefore, there is still a keen interest in finding glucose-tolerant β-glucosidase (BGL) that is active at high glucose concentrations. The main objective of this study was to identify, isolate, and characterize novel highly glucose-tolerant and halotolerant β-glucosidase gene (PersiBGL1) from the mixed genome DNA of sheep rumen metagenome as a suitable environment for efficient cellulase by computationally guided experiments instead of costly functional screening. At first, an screening approach was utilized to find primary candidate enzymes with superior properties. The structure-dependent mechanism of glucose tolerance was investigated for candidate enzymes. Among the computationally selected candidates, PersiBGL1 was cloned, isolated, and structurally characterized, which achieved very high activity in relatively high temperatures and alkaline pH and was successfully used for the hydrolysis of cellobiose. This enzyme exhibits a very high glucose tolerance, with the highest inhibition constant (8.8 M) among BGLs reported so far and retained 75% of its initial activity in the presence of 10 M glucose. Furthermore, a group of multivalent metal, including Mg, Mn, and Ca, as a cofactor, could improve the catalytic efficiency of PersiBGL1. Our results demonstrated the power of computational selected candidates to discover novel glucose tolerance BGL, effective for the bioconversion of lignocellulosic biomass.
通过酶促途径高效降解木质纤维素生物质时,纤维素酶的限速成分取决于葡萄糖苷酶对终产物(葡萄糖)的敏感性。因此,人们仍热衷于寻找在高葡萄糖浓度下仍具有活性的耐葡萄糖β-葡萄糖苷酶(BGL)。本研究的主要目的是通过计算指导的实验,而非昂贵的功能筛选,从绵羊瘤胃宏基因组的混合基因组DNA中鉴定、分离和表征新型的高度耐葡萄糖和耐盐β-葡萄糖苷酶基因(PersiBGL1),瘤胃是高效纤维素酶的适宜环境。首先,采用一种筛选方法来寻找具有优良特性的初级候选酶。研究了候选酶对葡萄糖耐受性的结构依赖性机制。在通过计算筛选出的候选酶中,PersiBGL1被克隆、分离并进行了结构表征,该酶在相对较高的温度和碱性pH条件下具有很高的活性,并成功用于纤维二糖的水解。这种酶表现出非常高的葡萄糖耐受性,其抑制常数是迄今报道的BGL中最高的(8.8 M),在10 M葡萄糖存在的情况下仍保留其初始活性的75%。此外,包括Mg、Mn和Ca在内的一组多价金属作为辅因子,可以提高PersiBGL1的催化效率。我们的结果证明了通过计算筛选候选酶来发现新型耐葡萄糖BGL的能力,该酶对木质纤维素生物质的生物转化有效。