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一种新型高性能的基于宏基因组筛选的耐碱耐热内切 β-1,4-葡聚糖酶,用于苛刻条件下的木质纤维素生物质水解。

A novel high performance in-silico screened metagenome-derived alkali-thermostable endo-β-1,4-glucanase for lignocellulosic biomass hydrolysis in the harsh conditions.

机构信息

Department of Systems and Synthetic Biology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREEO), P. O. Box: 31535-1897, Karaj, Iran.

Laboratory of Complex Biological Systems and Bioinformatics (CBB), Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, Iran.

出版信息

BMC Biotechnol. 2020 Oct 19;20(1):56. doi: 10.1186/s12896-020-00647-6.

Abstract

BACKGROUND

Lignocellulosic biomass, is a great resource for the production of bio-energy and bio-based material since it is largely abundant, inexpensive and renewable. The requirement of new energy sources has led to a wide search for novel effective enzymes to improve the exploitation of lignocellulose, among which the importance of thermostable and halotolerant cellulase enzymes with high pH performance is significant.

RESULTS

The primary aim of this study was to discover a novel alkali-thermostable endo-β-1,4-glucanase from the sheep rumen metagenome. At first, the multi-step in-silico screening approach was utilized to find primary candidate enzymes with superior properties. Among the computationally selected candidates, PersiCel4 was found and subjected to cloning, expression, and purification followed by functional and structural characterization. The enzymes' kinetic parameters, including V, K, and specific activity, were calculated. The PersiCel4 demonstrated its optimum activity at pH 8.5 and a temperature of 85 °C and was able to retain more than 70% of its activity after 150 h of storage at 85 °C. Furthermore, this enzyme was able to maintain its catalytic activity in the presence of different concentrations of NaCl and several metal ions contains Mg, Mn, Cu, Fe and Ca. Our results showed that treatment with MnCl could enhance the enzyme's activity by 78%. PersiCel4 was ultimately used for enzymatic hydrolysis of autoclave pretreated rice straw, the most abundant agricultural waste with rich cellulose content. In autoclave treated rice straw, enzymatic hydrolysis with the PersiCel4 increased the release of reducing sugar up to 260% after 72 h in the harsh condition (T = 85 °C, pH = 8.5).

CONCLUSION

Considering the urgent demand for stable cellulases that are operational on extreme temperature and pH conditions and due to several proposed distinctive characteristics of PersiCel4, it can be used in the harsh condition for bioconversion of lignocellulosic biomass.

摘要

背景

木质纤维素生物质是生产生物能源和生物基材料的重要资源,因为它丰富、廉价且可再生。对新能源的需求促使人们广泛寻找新型有效酶来提高木质纤维素的利用效率,其中具有高温和高 pH 性能的耐热和耐盐纤维素酶的重要性尤为显著。

结果

本研究的主要目的是从绵羊瘤胃宏基因组中发现一种新型碱性耐热内切 β-1,4-葡聚糖酶。首先,我们采用多步计算机筛选方法寻找具有优良性质的主要候选酶。在计算选择的候选酶中,我们发现并克隆了 PersiCel4,进行表达和纯化,并对其功能和结构进行了表征。我们计算了酶的动力学参数,包括 V、K 和比活性。PersiCel4 在 pH 8.5 和 85°C 下表现出最佳活性,在 85°C 下储存 150 小时后仍能保持超过 70%的活性。此外,该酶在不同浓度的 NaCl 和几种金属离子(包含 Mg、Mn、Cu、Fe 和 Ca)存在下仍能保持其催化活性。我们的结果表明,MnCl2 的处理可使酶活性提高 78%。最终,我们使用 PersiCel4 对高压釜预处理的水稻秸秆进行酶水解,水稻秸秆是最丰富的农业废弃物,含有丰富的纤维素。在高压釜处理的水稻秸秆中,在苛刻条件(T=85°C,pH=8.5)下,用 PersiCel4 进行酶水解可使还原糖的释放量增加 260%,达到 72 小时。

结论

考虑到对在极端温度和 pH 条件下工作的稳定纤维素酶的迫切需求,以及 PersiCel4 的几个独特特性,它可以用于生物转化木质纤维素生物质的苛刻条件。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ba6/7574624/3d84be3d2de1/12896_2020_647_Fig1_HTML.jpg

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