Vesoulis Zachary A, Gamble Paul G, Jain Siddharth, Ters Nathalie M El, Liao Steve M, Mathur Amit M
Department of Pediatrics, Division of Newborn Medicine, Washington University School of Medicine, 1 Children's Place, Campus Box 8116, St. Louis, MO 63110, USA.
Department of Pediatrics, Division of Newborn Medicine, Washington University School of Medicine, 1 Children's Place, Campus Box 8116, St. Louis, MO 63110, USA.
Comput Methods Programs Biomed. 2020 Nov;196:105716. doi: 10.1016/j.cmpb.2020.105716. Epub 2020 Aug 20.
Limited-channel EEG research in neonates is hindered by lack of open, accessible analytic tools. To overcome this limitation, we have created the Washington University-Neonatal EEG Analysis Toolbox (WU-NEAT), containing two of the most commonly used tools, provided in an open-source, clinically-validated package running within MATLAB.
The first algorithm is the amplitude-integrated EEG (aEEG), which is generated by filtering, rectifying and time-compressing the original EEG recording, with subsequent semi-logarithmic display. The second algorithm is the spectral edge frequency (SEF), calculated as the critical frequency below which a user-defined proportion of the EEG spectral power is located. The aEEG algorithm was validated by three experienced reviewers. Reviewers evaluated aEEG recordings of fourteen preterm/term infants, displayed twice in random order, once using a reference algorithm and again using the WU-NEAT aEEG algorithm. Using standard methodology, reviewers assigned a background pattern classification. Inter/intra-rater reliability was assessed. For the SEF, calculations were made using the same fourteen recordings, first with the reference and then with the WU-NEAT algorithm. Results were compared using Pearson's correlation coefficient.
For the aEEG algorithm, intra- and inter-rater reliability was 100% and 98%, respectively. For the SEF, the mean±SD Pearson correlation coefficient between algorithms was 0.96±0.04.
We have demonstrated a clinically-validated toolbox for generating the aEEG as well as calculating the SEF from EEG data. Open-source access will enable widespread use of common analytic algorithms which are device-independent and unlikely to become outdated as technology changes, thereby facilitating future collaborative research in neonatal EEG.
新生儿有限通道脑电图研究因缺乏开放、易用的分析工具而受到阻碍。为克服这一限制,我们创建了华盛顿大学新生儿脑电图分析工具箱(WU-NEAT),其中包含两种最常用的工具,以开源、经过临床验证的软件包形式运行于MATLAB中。
第一种算法是振幅整合脑电图(aEEG),它通过对原始脑电图记录进行滤波、整流和时间压缩,随后进行半对数显示来生成。第二种算法是频谱边缘频率(SEF),计算为脑电图频谱功率中用户定义比例以下的临界频率。aEEG算法由三位经验丰富的评审员进行验证。评审员评估了14名早产/足月儿的aEEG记录,记录以随机顺序显示两次,一次使用参考算法,另一次使用WU-NEAT的aEEG算法。评审员使用标准方法进行背景模式分类。评估了评分者间/评分者内的可靠性。对于SEF,使用相同的14份记录进行计算,首先使用参考算法,然后使用WU-NEAT算法。使用Pearson相关系数比较结果。
对于aEEG算法,评分者内和评分者间的可靠性分别为100%和98%。对于SEF,算法之间的平均±标准差Pearson相关系数为0.96±0.04。
我们展示了一个经过临床验证的工具箱,可用于生成aEEG以及从脑电图数据计算SEF。开源访问将使通用分析算法得到广泛应用,这些算法与设备无关,不太可能随着技术变化而过时,从而促进未来新生儿脑电图的合作研究。