Skirball Institute of Biomolecular Medicine, New York University School of Medicine, New York, United States.
Department of Cell Biology, New York University School of Medicine, New York, United States.
Elife. 2020 Sep 1;9:e61350. doi: 10.7554/eLife.61350.
Citrate, α-ketoglutarate and succinate are TCA cycle intermediates that also play essential roles in metabolic signaling and cellular regulation. These di- and tricarboxylates are imported into the cell by the divalent anion sodium symporter (DASS) family of plasma membrane transporters, which contains both cotransporters and exchangers. While DASS proteins transport substrates via an elevator mechanism, to date structures are only available for a single DASS cotransporter protein in a substrate-bound, inward-facing state. We report multiple cryo-EM and X-ray structures in four different states, including three hitherto unseen states, along with molecular dynamics simulations, of both a cotransporter and an exchanger. Comparison of these outward- and inward-facing structures reveal how the transport domain translates and rotates within the framework of the scaffold domain through the transport cycle. Additionally, we propose that DASS transporters ensure substrate coupling by a charge-compensation mechanism, and by structural changes upon substrate release.
柠檬酸盐、α-酮戊二酸和琥珀酸盐是 TCA 循环中间体,它们在代谢信号转导和细胞调节中也起着重要作用。这些二羧酸和三羧酸通过二价阴离子钠协同转运蛋白 (DASS) 家族的质膜转运蛋白进入细胞,该家族包含共转运体和交换体。虽然 DASS 蛋白通过提升机制转运底物,但迄今为止,只有一种底物结合的、内向构象的单一 DASS 共转运体蛋白的结构可用。我们报告了四个不同状态的多个 cryo-EM 和 X 射线结构,包括三个迄今未见的状态,以及共转运体和交换体的分子动力学模拟。这些外向和内向构象的比较揭示了转运结构域如何通过转运循环在支架结构域内平移和旋转。此外,我们提出 DASS 转运蛋白通过电荷补偿机制以及底物释放时的结构变化来确保底物偶联。