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电梯型二羧酸/三羧酸膜转运体的起起落落。

The ups and downs of elevator-type di-/tricarboxylate membrane transporters.

机构信息

Skirball Institute of Biomolecular Medicine, New York University School of Medicine, NY, USA.

* Centre for Medicines Discovery, Nuffield Department of Medicine, University of Oxford, UK.

出版信息

FEBS J. 2022 Mar;289(6):1515-1523. doi: 10.1111/febs.16158. Epub 2021 Aug 24.

Abstract

The divalent anion sodium symporter (DASS) family contains both sodium-driven anion cotransporters and anion/anion exchangers. The family belongs to a broader ion transporter superfamily (ITS), which comprises 24 families of transporters, including those of AbgT antibiotic efflux transporters. The human proteins in the DASS family play major physiological roles and are drug targets. We recently determined multiple structures of the human sodium-dependent citrate transporter (NaCT) and the succinate/dicarboxylate transporter from Lactobacillus acidophilus (LaINDY). Structures of both proteins show high degrees of structural similarity to the previously determined VcINDY fold. Conservation between these DASS protein structures and those from the AbgT family indicates that the VcINDY fold represents the overall protein structure for the entire ITS. The new structures of NaCT and LaINDY are captured in the inward- or outward-facing conformations, respectively. The domain arrangements in these structures agree with a rigid body elevator-type transport mechanism for substrate translocation across the membrane. Two separate NaCT structures in complex with a substrate or an inhibitor allowed us to explain the inhibition mechanism and propose a detailed classification scheme for grouping disease-causing mutations in the human protein. Structural understanding of multiple kinetic states of DASS proteins is a first step toward the detailed characterization of their entire transport cycle.

摘要

二价阴离子钠协同转运蛋白(DASS)家族包含钠离子驱动的阴离子共转运蛋白和阴离子/阴离子交换蛋白。该家族属于更广泛的离子转运蛋白超家族(ITS),其中包括 AbgT 抗生素外排转运蛋白家族。DASS 家族的人类蛋白发挥主要的生理作用,也是药物靶点。我们最近确定了人源依赖钠的柠檬酸转运蛋白(NaCT)和嗜酸乳杆菌(LaINDY)的琥珀酸/二羧酸转运蛋白的多个结构。这两种蛋白的结构与之前确定的 VcINDY 折叠具有高度的结构相似性。这些 DASS 蛋白结构与 AbgT 家族之间的保守性表明,VcINDY 折叠代表了整个 ITS 的总体蛋白结构。NaCT 和 LaINDY 的新结构分别捕获了内向或外向构象。这些结构中的结构域排列与底物跨膜转运的刚性体电梯式转运机制一致。与底物或抑制剂结合的两个独立的 NaCT 结构使我们能够解释抑制机制,并提出了一种详细的分类方案,用于对人类蛋白中的致病突变进行分组。对 DASS 蛋白多种动力学状态的结构理解是对其整个转运循环进行详细表征的第一步。

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