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印度严重急性呼吸综合征冠状病毒2的基因组进化及疫苗影响

Genomic evolution of severe acute respiratory syndrome Coronavirus 2 in India and vaccine impact.

作者信息

Jacob Jobin John, Vasudevan Karthick, Veeraraghavan Balaji, Iyadurai Ramya, Gunasekaran Karthik

机构信息

Division of Molecular Biology and Translational Bioinformatics, Department of Clinical Microbiology, Christian Medical College, Vellore, Tamil Nadu, India.

Hilda Lazarus Core Research Chair, Christian Medical College, Vellore, Tamil Nadu, India.

出版信息

Indian J Med Microbiol. 2020 Apr-Jun;38(2):210-212. doi: 10.4103/ijmm.IJMM_20_303.

Abstract

Recent emergence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and subsequent containment procedures have impacted the world as never seen before. Therefore, there is considerable curiosity about the genome evolution related to the origin, transmission and vaccine impact of this virus. We have analysed genome sequences of SARS-CoV-2 isolated from Indian patients to gain an in-depth understanding of genomic evolution and transmission in India. Phylogenetic analysis and mutation profiling revealed major lineages being evolved by characteristic mutations. As the mutation frequency in spike protein is comparatively lesser, the candidate vaccines expected to have wide coverage worldwide including India.

摘要

严重急性呼吸综合征冠状病毒2(SARS-CoV-2)最近的出现以及随后的防控措施对世界产生了前所未有的影响。因此,人们对与这种病毒的起源、传播和疫苗影响相关的基因组进化充满了好奇。我们分析了从印度患者中分离出的SARS-CoV-2的基因组序列,以深入了解印度的基因组进化和传播情况。系统发育分析和突变谱分析表明,主要谱系是由特征性突变进化而来的。由于刺突蛋白中的突变频率相对较低,预计候选疫苗在包括印度在内的全球范围内都能有广泛的覆盖。

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本文引用的文献

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Epidemic Landscape and Forecasting of SARS-CoV-2 in India.印度 SARS-CoV-2 的疫情形势和预测。
J Epidemiol Glob Health. 2021 Mar;11(1):55-59. doi: 10.2991/jegh.k.200823.001. Epub 2020 Aug 28.

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