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粗棕榈油与葡萄糖培养的万能真菌弯颈霉的比较代谢组学研究。

Comparative metabolomics of Phialemonium curvatum as an omnipotent fungus cultivated on crude palm oil versus glucose.

机构信息

Institute of Systems Biology, Universiti Kebangsaan Malaysia (UKM), 43600, Bangi, Selangor, Malaysia.

Institute of Biotechnology, Brandenburg University of Technology Cottbus -Senftenberg, Universitaetsplatz 1, 01968, Senftenberg, Germany.

出版信息

Microb Cell Fact. 2020 Sep 9;19(1):179. doi: 10.1186/s12934-020-01434-w.

Abstract

BACKGROUND

Sugars and triglycerides are common carbon sources for microorganisms. Nonetheless, a systematic comparative interpretation of metabolic changes upon vegetable oil or glucose as sole carbon source is still lacking. Selected fungi that can grow in acidic mineral salt media (MSM) with vegetable oil had been identified recently. Hence, this study aimed to investigate the overall metabolite changes of an omnipotent fungus and to reveal changes at central carbon metabolism corresponding to both carbon sources.

RESULTS

Targeted and non-targeted metabolomics for both polar and semi-polar metabolites of Phialemonium curvatum AWO2 (DSM 23903) cultivated in MSM with palm oil (MSM-P) or glucose (MSM-G) as carbon sources were obtained. Targeted metabolomics on central carbon metabolism of tricarboxylic acid (TCA) cycle and glyoxylate cycle were analysed using LC-MS/MS-TripleQ and GC-MS, while untargeted metabolite profiling was performed using LC-MS/MS-QTOF followed by multivariate analysis. Targeted metabolomics analysis showed that glyoxylate pathway and TCA cycle were recruited at central carbon metabolism for triglyceride and glucose catabolism, respectively. Significant differences in organic acids concentration of about 4- to 8-fold were observed for citric acid, succinic acid, malic acid, and oxaloacetic acid. Correlation of organic acids concentration and key enzymes involved in the central carbon metabolism was further determined by enzymatic assays. On the other hand, the untargeted profiling revealed seven metabolites undergoing significant changes between MSM-P and MSM-G cultures.

CONCLUSIONS

Overall, this study has provided insights on the understanding on the effect of triglycerides and sugar as carbon source in fungi global metabolic pathway, which might become important for future optimization of carbon flux engineering in fungi to improve organic acids production when vegetable oil is applied as the sole carbon source.

摘要

背景

糖和甘油三酯是微生物常见的碳源。然而,对于植物油或葡萄糖作为唯一碳源时代谢变化的系统比较解释仍然缺乏。最近已经鉴定出一些能够在含有植物油的酸性无机盐培养基(MSM)中生长的真菌。因此,本研究旨在研究一种全能真菌的整体代谢物变化,并揭示与两种碳源相对应的中心碳代谢变化。

结果

对 Phialemonium curvatum AWO2(DSM 23903)在 MSM 中用棕榈油(MSM-P)或葡萄糖(MSM-G)作为碳源培养时的极性和半极性代谢物进行了靶向和非靶向代谢组学分析。使用 LC-MS/MS-TripleQ 和 GC-MS 对三羧酸(TCA)循环和乙醛酸循环的中心碳代谢进行了靶向代谢组学分析,而使用 LC-MS/MS-QTOF 进行了非靶向代谢物谱分析,并进行了多元分析。靶向代谢组学分析表明,甘油三酯和葡萄糖分解代谢分别在中心碳代谢中招募乙醛酸途径和 TCA 循环。柠檬酸、琥珀酸、苹果酸和草酰乙酸的浓度差异约为 4-8 倍。通过酶活性测定进一步确定了有机酸浓度与中心碳代谢中关键酶之间的相关性。另一方面,非靶向分析显示 MSM-P 和 MSM-G 培养物之间有七种代谢物发生了显著变化。

结论

总的来说,本研究提供了对甘油三酯和糖作为真菌全局代谢途径中碳源的影响的理解,这对于未来优化真菌中碳通量工程以提高植物油作为唯一碳源时有机酸的生产可能变得非常重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47c4/7487481/dbe5551ef232/12934_2020_1434_Fig1_HTML.jpg

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