Pan Sichen, Yang Chen, Zhao Xin Sheng
Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable and Stable Species, and Department of Chemical Biology, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China.
Biomedical Pioneering Innovation Center (BIOPIC), Peking University, Beijing, 100871, China.
Sci Rep. 2020 Sep 10;10(1):14871. doi: 10.1038/s41598-020-71608-4.
Outer membrane proteins (OMPs) are essential to gram-negative bacteria, and molecular chaperones prevent the OMPs from aggregation in the periplasm during the OMPs biogenesis. Skp is one of the molecular chaperones for this purpose. Here, we combined single-molecule fluorescence resonance energy transfer and fluorescence correlation spectroscopy to study the affinity and stoichiometric ratio of Skp in its binding with OmpC at the single-molecule level. The half concentration of the Skp self-trimerization (C) was measured to be (2.5 ± 0.7) × 10 nM. Under an Skp concentration far below the C, OmpC could recruit Skp monomers to form OmpC·Skp. The affinity to form the OmpC·Skp complex was determined to be (5.5 ± 0.4) × 10 pM with a Hill coefficient of 1.6 ± 0.2. Under the micromolar concentrations of Skp, the formation of OmpC·(Skp) was confirmed, and the dissociation constant of OmpC·(Skp) was determined to be 1.2 ± 0.4 μM. The precise information will help us to quantitatively depict the role of Skp in the biogenesis of OMPs.
外膜蛋白(OMPs)对革兰氏阴性菌至关重要,分子伴侣可防止OMPs在周质中生物合成过程中发生聚集。Skp就是为此目的发挥作用的分子伴侣之一。在此,我们结合单分子荧光共振能量转移和荧光相关光谱技术,在单分子水平上研究Skp与OmpC结合时的亲和力和化学计量比。测得Skp自三聚化的半浓度(C)为(2.5±0.7)×10 nM。在Skp浓度远低于C时,OmpC可招募Skp单体形成OmpC·Skp。形成OmpC·Skp复合物的亲和力经测定为(5.5±0.4)×10 pM,希尔系数为1.6±0.2。在微摩尔浓度的Skp条件下,证实了OmpC·(Skp)的形成,且OmpC·(Skp)的解离常数经测定为1.2±0.4 μM。这些精确信息将有助于我们定量描述Skp在OMPs生物合成中的作用。