Miglani Manjula, Rain Manjari, Pasha Qadar, Raj V Samuel, Thinlas Tashi, Mohammad Ghulam, Gupta Archana, Pandey Ramendra Pati, Vibhuti Arpana
Department of Biotechnology, SRM University, Delhi-NCR, Sonepat, Haryana 131029, India.
Functional Genomics Unit, Institute of Genomics and Integrative Biology, Council of Scientific and Industrial Research, Delhi, 110007, India.
Hum Mol Genet. 2020 Nov 4;29(18):3094-3106. doi: 10.1093/hmg/ddaa205.
High-altitude pulmonary edema (HAPE) is a noncardiogenic form of pulmonary edema, which is induced upon exposure to hypobaric hypoxia at high altitude (HA). Hypobaric hypoxia generates reactive oxygen species that may damage telomeres and disturb normal physiological processes. Telomere complex comprises of multiple proteins, of which, tankyrase (TNKS) is actively involved in DNA damage repairs. We hence investigated the association of TNKS and telomeres with HAPE to delineate their potential role at HA. The study was performed in three groups, High-altitude pulmonary edema patients (HAPE-p, n = 200), HAPE-resistant sojourners (HAPE-r, n = 200) and highland permanent healthy residents (HLs, n = 200). Variants of TNKS were genotyped using polymerase chain reaction-restriction fragment length polymorphism. Plasma TNKS level was estimated using enzyme-linked immunosorbent assay, expression of TNKS and relative telomere length were assessed by reverse transcription-quantitative polymerase chain reaction (RT-qPCR), and telomerase activity was assessed by the telomere repeat amplification protocol assay. TNKS poly-ADP ribosylates the telomere-repeat factor (TRF), which is a negative regulator of telomere length. Consequently, TRF expression was also measured by RT-qPCR. The TNKS heterozygotes rs7015700GA were prevalent in HLs compared to the HAPE-p and HAPE-r. The plasma TNKS was significantly decreased in HAPE-p than HAPE-r (P = 0.006). TNKS was upregulated 9.27 folds in HAPE-p (P = 1.01E-06) and downregulated in HLs by 3.3 folds (P = 0.02). The telomere length was shorter in HAPE-p compared to HAPE-r (P = 0.03) and HLs (P = 4.25E-4). The telomerase activity was significantly higher in HAPE-p compared to both HAPE-r (P = 0.01) and HLs (P = 0.001). HAPE-p had the lowest TNKS levels (0.186 ± 0.031 ng/μl) and the highest telomerase activity (0.0268 amoles/μl). The findings of the study indicate the association of TNKS and telomeres with HA adaptation/maladaptation.
高原肺水肿(HAPE)是一种非心源性肺水肿,是在高海拔(HA)暴露于低压缺氧环境时诱发的。低压缺氧会产生活性氧,可能会损伤端粒并扰乱正常生理过程。端粒复合体由多种蛋白质组成,其中端粒酶(TNKS)积极参与DNA损伤修复。因此,我们研究了TNKS和端粒与HAPE的关联,以阐明它们在高海拔地区的潜在作用。该研究在三组中进行,即高原肺水肿患者(HAPE-p,n = 200)、对HAPE有抵抗力的旅居者(HAPE-r,n = 200)和高原永久健康居民(HLs,n = 200)。使用聚合酶链反应-限制性片段长度多态性对TNKS的变体进行基因分型。使用酶联免疫吸附测定法估计血浆TNKS水平,通过逆转录-定量聚合酶链反应(RT-qPCR)评估TNKS的表达和相对端粒长度,并通过端粒重复序列扩增协议测定法评估端粒酶活性。TNKS对端粒重复因子(TRF)进行多聚ADP核糖基化,TRF是端粒长度的负调节因子。因此,也通过RT-qPCR测量TRF的表达。与HAPE-p和HAPE-r相比,TNKS杂合子rs7015700GA在HLs中更为普遍。HAPE-p组的血浆TNKS水平明显低于HAPE-r组(P = 0.006)。HAPE-p组中TNKS上调了9.27倍(P = 1.01E-06),而在HLs组中下调了3.3倍(P = 0.02)。与HAPE-r组(P = 0.03)和HLs组(P = 4.25E-4)相比,HAPE-p组的端粒长度更短。与HAPE-r组(P = 0.01)和HLs组(P = 0.001)相比,HAPE-p组的端粒酶活性明显更高。HAPE-p组的TNKS水平最低(0.186±0.031 ng/μl),端粒酶活性最高(0.0268 amoles/μl)。该研究结果表明TNKS和端粒与高原适应/适应不良有关。