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开发一种改良的 Amplex Red 过氧化物酶活性测定法,用于筛选细胞色素 P450 变体,并鉴定一种新型耐热 CYP119 突变体。

Development of an improved Amplex Red peroxidation activity assay for screening cytochrome P450 variants and identification of a novel mutant of the thermophilic CYP119.

机构信息

Department of Bioengineering, İzmir Institute of Technology, Gülbahçe, Urla, Izmir, Turkey.

Program in Biotechnology and Bioengineering, İzmir Institute of Technology, Gülbahce, Urla, Izmir, Turkey.

出版信息

J Biol Inorg Chem. 2020 Oct;25(7):949-962. doi: 10.1007/s00775-020-01816-w. Epub 2020 Sep 13.

DOI:10.1007/s00775-020-01816-w
PMID:32924072
Abstract

Biocatalysts are increasingly utilized in the synthesis of drugs and agrochemicals as an alternative to chemical catalysis. They are preferred in the synthesis of enantiopure products due to their high regioselectivity and enantioselectivity. Cytochrome P450 (P450) oxygenases are valuable biocatalysts, since they catalyze the oxidation of carbon-hydrogen bonds with high efficiency and selectivity. However, practical use of P450s is limited due to their need for expensive cofactors and electron transport partners. P450s can employ hydrogen peroxide (HO) as an oxygen and electron donor, but the reaction with HO is inefficient. The development of P450s that can use HO will expand their applications. Here, an assay that utilizes Amplex Red peroxidation, to rapidly screen HO-dependent activity of P450 mutants in cell lysate was developed. This assay was employed to identify mutants of CYP119, a thermophilic P450 from Sulfolobus acidocaldarius, with increased peroxidation activity. A mutant library of CYP119 containing substitutions in the heme active site was constructed via combinatorial active-site saturation test and screened for improved activity. Screening of 158 colonies led to five mutants with higher activity. Among improved variants, T213R/T214I was characterized. T213R/T214I exhibited fivefold higher k for Amplex Red peroxidation and twofold higher k for styrene epoxidation. T213R/T214I showed higher stability towards heme degradation by HO. While the K for HO and styrene were not altered by the mutation, a fourfold decrease in the affinity for another substrate, lauric acid, was observed. In conclusion, Amplex Red peroxidation screening of CYP119 mutants yielded enzymes with increased peroxide-dependent activity.

摘要

生物催化剂越来越多地被用于药物和农用化学品的合成,作为化学催化的替代方法。由于其高区域选择性和对映选择性,它们在对映纯产物的合成中更受欢迎。细胞色素 P450(P450)加氧酶是有价值的生物催化剂,因为它们可以高效和选择性地催化碳-氢键的氧化。然而,由于它们需要昂贵的辅因子和电子传递伙伴,P450 的实际应用受到限制。P450 可以利用过氧化氢(HO)作为氧和电子供体,但与 HO 的反应效率不高。开发能够利用 HO 的 P450 将扩大它们的应用范围。在这里,开发了一种利用 Amplex Red 过氧化物酶反应快速筛选细胞裂解物中 P450 突变体 HO 依赖性活性的测定方法。该测定方法用于鉴定嗜热 Sulfolobus acidocaldarius 的 CYP119 突变体,该突变体具有增强的过氧化物酶活性。通过组合活性位点饱和试验构建了 CYP119 的突变体文库,包含在血红素活性位点的取代,并筛选出具有增强活性的突变体。对 158 个菌落进行筛选,得到了 5 个活性更高的突变体。在改进的变体中,T213R/T214I 进行了表征。T213R/T214I 在 Amplex Red 过氧化物酶反应中的 k 值提高了五倍,在苯乙烯环氧化中的 k 值提高了两倍。T213R/T214I 对 HO 引起的血红素降解表现出更高的稳定性。虽然突变没有改变 HO 和苯乙烯的 K 值,但观察到对另一种底物月桂酸的亲和力降低了四倍。总之,通过 Amplex Red 过氧化物酶筛选 CYP119 突变体得到了具有增强的过氧化物依赖性活性的酶。

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