Suppr超能文献

胃癌中的微小RNA表达谱分析及靶基因分析

MicroRNA expression profiling and target gene analysis in gastric cancer.

作者信息

Xu Chenguang, Xie Juan, Liu Yanping, Tang Fenfen, Long Zhi, Wang Yaodong, Luo Jiangyan, Li Junda, Li Guoqing

机构信息

Department of Gastroenterology, the Second Affiliated Hospital, University of South China, Hengyang.

Department of Gastroenterology, People's Hospital of Longhua District, Shenzhen.

出版信息

Medicine (Baltimore). 2020 Sep 11;99(37):e21963. doi: 10.1097/MD.0000000000021963.

Abstract

This study aims to identify differentially expressed microRNAs (miRNAs) in gastric cancer by comparing gastric cancerous tissues with normal tissues, explore the potential roles.The miRNA expression microarray was employed on gastric cancer tissues, and apparently normal para-cancerous tissues from 3 patients undergoing radical surgery were matched. Quantitative RT-PCR was performed on the other 7 patients to validate the findings of the microarray. Furthermore, Gene Ontology (GO) analysis and enrichment analysis of KEGG Pathway were performed for 5 dysregulated candidate miRNAs, including 3 upregulated (miR-31-3p, miR-6736-3p, and miR-147b) and 2 downregulated (miR-3065-5p and miR-3921) miRNAs, in order to determine the role of miRNAs in tumorigenesis and development.Among these miRNAs, 17 miRNAs were found to be upregulated, and 19 miRNAs were found to be downregulated. The dysregulated expression of 5 candidate miRNAs, including miR-31-3p, miR-147b, miR-6736-3p, miR-3065-5p, and miR-3921, were verified by quantitative RT-PCR in the validation set. Among these miRNAs, miR-31-3p, miR-6736-3p, miR-3065-5p, and miR-3921 had 551 target gene intersections. The GO and KEGG Pathway analyses Revealed that miR-31-3p, miR-6736-3p, miR-3065-5p, and miR-3921 may participate in multiple pathophysiological processes, such as foreign substance metabolism and chemical carcinogenesis.The profile of differentially expressed miRNAs was successfully screened, and 4 miRNAs (i.e., miR-31-3p, miR-6736-3p, miR-3065-5p, and miR-3921) appeared to be involved in gastric carcinogenesis. These might serve as promising biomarkers for gastric cancer.

摘要

本研究旨在通过比较胃癌组织与正常组织来鉴定胃癌中差异表达的微小RNA(miRNA),探索其潜在作用。对胃癌组织进行了miRNA表达微阵列检测,并匹配了3例接受根治性手术患者的明显正常癌旁组织。对另外7例患者进行定量逆转录聚合酶链反应(qRT-PCR)以验证微阵列的结果。此外,对5个失调的候选miRNA进行基因本体论(GO)分析和KEGG通路富集分析,这5个候选miRNA包括3个上调的(miR-31-3p、miR-6736-3p和miR-147b)和2个下调的(miR-3065-5p和miR-3921)miRNA,以确定miRNA在肿瘤发生和发展中的作用。在这些miRNA中,发现17个miRNA上调,19个miRNA下调。通过qRT-PCR在验证集中验证了5个候选miRNA(包括miR-31-3p、miR-147b、miR-6736-3p、miR-3065-5p和miR-3921)的失调表达。在这些miRNA中,miR-31-3p、miR-6736-3p、miR-3065-5p和miR-3921有551个靶基因交集。GO和KEGG通路分析显示,miR-31-3p、miR-6736-3p、miR-3065-5p和miR-3921可能参与多种病理生理过程,如异物代谢和化学致癌作用。成功筛选出差异表达miRNA的图谱,4个miRNA(即miR-31-3p、miR-6736-3p、miR-3065-5p和miR-3921)似乎参与胃癌发生。这些可能成为有前景的胃癌生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7df2/7489646/2f63d5c36787/medi-99-e21963-g002.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验