Suppr超能文献

- 参与抗肿瘤 dnacin B1 醌部分形成的苯丙氨酸。

-Aminophenylalanine Involved in the Biosynthesis of Antitumor Dnacin B1 for Quinone Moiety Formation.

机构信息

State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, and School of Life Sciences & Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.

Zhuhai Precision Medical Center, Zhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Zhuhai 519000, China.

出版信息

Molecules. 2020 Sep 12;25(18):4186. doi: 10.3390/molecules25184186.

Abstract

species produce diverse natural products with important biological activities, which represent an important resource of antibiotic discovery. Advances in genome sequencing and bioinformatics tools have accelerated the exploration of the biosynthetic gene clusters (BGCs) encoding natural products. Herein, the completed BGCs of dnacin B1 were first discovered in two subsp. strains DSM 44131 (hereafter abbreviated as strain DSM 44131) and X47 by comparative genome mining strategy. The BGC for dnacin B1 contains 41 ORFs and spans a 66.9 kb DNA region in strain DSM 44131. Its involvement in dnacin B1 biosynthesis was identified through the deletion of a 9.7 kb region. Based on the functional gene analysis, we proposed the biosynthetic pathway for dnacin B1. Moreover, -amino-phenylalanine (PAPA) unit was found to be the dnacin B1 precursor for the quinone moiety formation, and this was confirmed by heterologous expression of , and in . Furthermore, nine potential PAPA aminotransferases (APAT) from the genome of strain DSM 44131 were explored and expressed. Biochemical evaluation of their amino group transformation ability was carried out with -amino-phenylpyruvic acid (PAPP) or PAPA as the substrate for the final product formation. Two of those, APAT4 and APAT9, displayed intriguing aminotransferase ability for the formation of PAPA. The proposed dnacin B1 biosynthetic machinery and PAPA biosynthetic investigations not only enriched the knowledge of tetrahydroisoquinoline (THIQ) biosynthesis, but also provided PAPA building blocks to generate their structurally unique homologues.

摘要

物种产生具有重要生物活性的多种天然产物,这些产物代表了抗生素发现的重要资源。基因组测序和生物信息学工具的进步加速了对编码天然产物的生物合成基因簇(BGCs)的探索。在此,通过比较基因组挖掘策略,首次在两个 subsp. 菌株 DSM 44131(以下简称菌株 DSM 44131)和 X47 中发现了 dnacin B1 的完整 BGC。dnacin B1 的 BGC 包含 41 个 ORF,跨越菌株 DSM 44131 中 66.9 kb 的 DNA 区域。通过删除 9.7 kb 区域来鉴定其参与 dnacin B1 生物合成。基于功能基因分析,我们提出了 dnacin B1 的生物合成途径。此外,-氨基苯丙氨酸(PAPA)单元被发现是醌部分形成的 dnacin B1 前体,这通过在 中异源表达 、 和 得到了证实。此外,从菌株 DSM 44131 的基因组中探索并表达了九个潜在的 PAPA 氨基转移酶(APAT)。用 -氨基苯丙酮酸(PAPP)或 PAPA 作为最终产物形成的底物,对其氨基转化能力进行了生化评估。其中两个,APAT4 和 APAT9,显示出对 PAPA 形成的有趣的氨基转移酶能力。所提出的 dnacin B1 生物合成机制和 PAPA 生物合成研究不仅丰富了四氢异喹啉(THIQ)生物合成的知识,而且还为生成其结构独特的同源物提供了 PAPA 构建块。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f27/7570522/48c74cbde41e/molecules-25-04186-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验