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从头转录组学和代谢组学分析揭示了高海拔地区的生态适应性 。

De Novo Transcriptomic and Metabolomic Analyses Reveal the Ecological Adaptation of High-Altitude .

作者信息

Liu Yanjie, Zhao Huiyue, Luo Qihua, Yang Yadong, Zhang Guangshuo, Zhou Zhiyong, Naeem Muhammad, An Jiandong

机构信息

Key Laboratory for Insect-Pollinator Biology of the Ministry of Agriculture, Institute of Apicultural Research, Chinese Academy of Agricultural Sciences, Beijing 100093, China.

Miyun District Bureau of Landscape and Forestry, Beijing 101500, China.

出版信息

Insects. 2020 Sep 14;11(9):631. doi: 10.3390/insects11090631.

Abstract

is one of the most abundant bumblebee species in China, with a distribution range of very varied geomorphology and vegetation, which makes it an ideal pollinator species for research into high-altitude adaptation. Here, we sequenced and assembled transcriptomes of from the low-altitude North China Plain and the high-altitude Tibet Plateau. Subsequent comparative analysis of de novo transcriptomes from the high- and low-altitude groups identified 675 common upregulated genes (DEGs) in the high-altitude . These genes were enriched in metabolic pathways and corresponded to enzyme activities involved in energy metabolism. Furthermore, according to joint analysis with comparative metabolomics, we suggest that the metabolism of coenzyme A (CoA) and the metabolism and transport of energy resources contribute to the adaptation of high-altitude . Meanwhile, we found many common upregulated genes enriched in the Toll and immune deficiency (Imd)signaling pathways that act as important immune defenses in insects, and hypoxia and cold temperatures could induce the upregulation of immune genes in insects. Therefore, we suppose that the Toll and Imd signaling pathways also participated in the high-altitude adaptation of . Like other organisms, we suggest that the high-altitude adaptation of is controlled by diverse mechanisms.

摘要

是中国最常见的熊蜂物种之一,其分布范围涵盖了地貌和植被极为多样的地区,这使其成为研究高海拔适应性的理想传粉物种。在此,我们对来自低海拔华北平原和高海拔青藏高原的[具体熊蜂物种名称未给出]进行了转录组测序和组装。随后对高海拔和低海拔群体的从头转录组进行比较分析,在高海拔[具体熊蜂物种名称未给出]中鉴定出675个共同上调基因(差异表达基因)。这些基因在代谢途径中富集,并且对应于参与能量代谢的酶活性。此外,根据与比较代谢组学的联合分析,我们认为辅酶A(CoA)的代谢以及能量资源的代谢和运输有助于高海拔[具体熊蜂物种名称未给出]的适应性。同时,我们发现许多共同上调基因在Toll和免疫缺陷(Imd)信号通路中富集,这些通路在昆虫中作为重要的免疫防御起作用,并且缺氧和低温可诱导昆虫免疫基因的上调。因此,我们推测Toll和Imd信号通路也参与了[具体熊蜂物种名称未给出]的高海拔适应性。与其他生物一样,我们认为[具体熊蜂物种名称未给出]的高海拔适应性受多种机制控制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f95/7563474/e5dd8f63030e/insects-11-00631-g001.jpg

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