Key Laboratory of Biofuels, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101, China.
Shandong Provincial Key Laboratory of Synthetic Biology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101, China.
Commun Biol. 2020 Sep 23;3(1):528. doi: 10.1038/s42003-020-01260-1.
Polyol and sugar osmolytes are commonly used in therapeutic protein formulations. How they may affect protein structure and function is an important question. In this work, through NMR measurements, we show that glycerol and sorbitol (polyols), as well as glucose (sugar), can shorten protein backbone hydrogen bonds. The hydrogen bond shortening is also captured by molecular dynamics simulations, which suggest a hydrogen bond competition mechanism. Specifically, osmolytes weaken hydrogen bonds between the protein and solvent to strengthen those within the protein. Although the hydrogen bond change is small, with the average experimental cross hydrogen bond J coupling of two proteins GB3 and TTHA increased by ~ 0.01 Hz by the three osmolytes (160 g/L), its effect on protein function should not be overlooked. This is exemplified by the PDZ3-peptide binding where several intermolecular hydrogen bonds are formed and osmolytes shift the equilibrium towards the bound state.
多元醇和糖渗透剂常用于治疗性蛋白制剂。它们如何影响蛋白质的结构和功能是一个重要的问题。在这项工作中,通过 NMR 测量,我们表明甘油和山梨糖醇(多元醇)以及葡萄糖(糖)可以缩短蛋白质骨架氢键。分子动力学模拟也捕捉到了氢键缩短,这表明存在氢键竞争机制。具体来说,渗透剂削弱了蛋白质和溶剂之间的氢键,以加强蛋白质内部的氢键。尽管氢键的变化很小,但三种渗透剂(160g/L)使两个蛋白 GB3 和 TTHA 的平均实验交叉氢键 J 耦合增加了约 0.01 Hz,其对蛋白质功能的影响不应被忽视。这在 PDZ3-肽结合中得到了例证,其中形成了几个分子间氢键,渗透剂使平衡向结合状态移动。